Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I14
(414 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 103 3e-22
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 103 3e-22
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 103 3e-22
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 103 3e-22
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 97 3e-20
BC047309-1|AAH47309.1| 473|Homo sapiens zinc finger and SCAN do... 32 0.87
AL136865-1|CAB66799.1| 473|Homo sapiens hypothetical protein pr... 32 0.87
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 31 1.5
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 31 1.5
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 31 1.5
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 31 1.5
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 31 1.5
BC011002-1|AAH11002.2| 319|Homo sapiens LOC113230 protein protein. 31 2.0
Z82215-4|CAB05105.1| 1960|Homo sapiens myosin, heavy chain 9, no... 30 2.6
M31013-1|AAA36349.1| 1247|Homo sapiens protein ( Human nonmuscle... 30 2.6
CR456526-1|CAG30412.1| 1960|Homo sapiens MYH9 protein. 30 2.6
AL832639-1|CAD89954.1| 1331|Homo sapiens hypothetical protein pr... 30 2.6
AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein. 30 2.6
AB191263-1|BAD52439.1| 1960|Homo sapiens non-muscle myosin heavy... 30 2.6
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 30 3.5
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 30 3.5
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 30 3.5
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 30 3.5
AF217743-1|AAK51611.1| 734|Homo sapiens protocadherin-psi2 prot... 29 6.1
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 103 bits (246), Expect = 3e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M+R+ VRGIS+KLQEEERERRD YVPEVSAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF +++ LQ+TQP
Sbjct: 109 LDFGSLSNLQVTQP 122
Score = 74.5 bits (175), Expect = 1e-13
Identities = 35/56 (62%), Positives = 38/56 (67%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTH 56
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 96.7 bits (230), Expect = 3e-20
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K G M+++ VRGIS+KLQEE RERRD YVPE+SAL+Q+IIEVD DTK+MLK+
Sbjct: 49 KTAGYVTHLMKQIQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLKL 108
Query: 362 LDFSNINGLQLTQP 403
LDF ++ LQ+TQP
Sbjct: 109 LDFGGLSNLQVTQP 122
Score = 56.0 bits (129), Expect = 5e-08
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MG V T YY L DF TNK +C+EIAIIP+K L NK AG+ TH
Sbjct: 1 MGHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTH 56
>BC047309-1|AAH47309.1| 473|Homo sapiens zinc finger and SCAN
domain containing 21 protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 179 TKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQ 316
TK+LG P+ R QV + VK+ EE+E + KY+P + Q
Sbjct: 3 TKVLGMAPVLGPRPPQEQVGPLMVKV--EEKEEKGKYLPSLEMFRQ 46
>AL136865-1|CAB66799.1| 473|Homo sapiens hypothetical protein
protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 179 TKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQ 316
TK+LG P+ R QV + VK+ EE+E + KY+P + Q
Sbjct: 3 TKVLGMAPVLGPRPPQEQVGPLMVKV--EEKEEKGKYLPSLEMFRQ 46
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 257 QEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKMLD 367
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 257 QEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKMLD 367
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 257 QEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKMLD 367
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 257 QEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKMLD 367
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 257 QEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKMLD 367
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>BC011002-1|AAH11002.2| 319|Homo sapiens LOC113230 protein protein.
Length = 319
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 182 KLLGS-PPIFMRRLIHSQVRGISVKLQEEERERRDKY 289
++LGS PP F L+ +VR + + QE +R+RR Y
Sbjct: 240 RVLGSAPPPFTPSLLEQEVRAVREREQELQRQRRSVY 276
>Z82215-4|CAB05105.1| 1960|Homo sapiens myosin, heavy chain 9,
non-muscle protein.
Length = 1960
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 212 RRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII----EVDSDTKD 349
R+ + Q + + VKLQE E + KY ++ALE I ++D++TK+
Sbjct: 1780 RQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKE 1829
>M31013-1|AAA36349.1| 1247|Homo sapiens protein ( Human nonmuscle
myosin heavy chain (NMHC) mRNA, 3' end. ).
Length = 1247
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 212 RRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII----EVDSDTKD 349
R+ + Q + + VKLQE E + KY ++ALE I ++D++TK+
Sbjct: 1067 RQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKE 1116
>CR456526-1|CAG30412.1| 1960|Homo sapiens MYH9 protein.
Length = 1960
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 212 RRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII----EVDSDTKD 349
R+ + Q + + VKLQE E + KY ++ALE I ++D++TK+
Sbjct: 1780 RQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKE 1829
>AL832639-1|CAD89954.1| 1331|Homo sapiens hypothetical protein
protein.
Length = 1331
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 212 RRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII----EVDSDTKD 349
R+ + Q + + VKLQE E + KY ++ALE I ++D++TK+
Sbjct: 1202 RQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKE 1251
>AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein.
Length = 563
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 212 RRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII----EVDSDTKD 349
R+ + Q + + VKLQE E + KY ++ALE I ++D++TK+
Sbjct: 383 RQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKE 432
>AB191263-1|BAD52439.1| 1960|Homo sapiens non-muscle myosin heavy
polypeptide 9 protein.
Length = 1960
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 212 RRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII----EVDSDTKD 349
R+ + Q + + VKLQE E + KY ++ALE I ++D++TK+
Sbjct: 1780 RQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKE 1829
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 215 RLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDM 352
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 215 RLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDM 352
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 215 RLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDM 352
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 215 RLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDM 352
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AF217743-1|AAK51611.1| 734|Homo sapiens protocadherin-psi2
protein.
Length = 734
Score = 29.1 bits (62), Expect = 6.1
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +2
Query: 146 KLLSFLLSLFATKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDII 325
K+ F L+L A GSPP LI+ V IS E E+ + +VPE S L+ II
Sbjct: 150 KVSEFSLTLTAVDG-GSPPRSGTTLINVVVLDISDNAPEFEKPVYEVHVPESSPLDSLII 208
Query: 326 EVDSDTKD 349
+ + D
Sbjct: 209 KASATDLD 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,419,278
Number of Sequences: 237096
Number of extensions: 1160673
Number of successful extensions: 2622
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2622
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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