Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I14
(414 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 117 5e-27
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 117 5e-27
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 117 5e-27
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 117 5e-27
Y10229-1|CAA71278.1| 784|Drosophila melanogaster RAD54 protein. 30 1.4
AY069599-1|AAL39744.2| 788|Drosophila melanogaster LD35220p pro... 30 1.4
AF069780-1|AAC26857.1| 628|Drosophila melanogaster RAD54 DNA re... 30 1.4
AF069779-1|AAC24577.1| 784|Drosophila melanogaster Rad54 homolo... 30 1.4
AE014134-530|AAF51168.1| 784|Drosophila melanogaster CG3736-PA ... 30 1.4
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr... 29 3.2
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA... 29 3.2
DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein. 28 5.6
AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA... 28 5.6
AY459353-1|AAR88134.1| 519|Drosophila melanogaster CYP6G2 protein. 27 7.4
AE013599-1417|AAF58556.1| 519|Drosophila melanogaster CG8859-PA... 27 7.4
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 117 bits (282), Expect = 5e-27
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M RL HSQVRGIS+KLQEEERERRD YVP VSALEQDIIEVD+DTK+MLK+
Sbjct: 49 KIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKL 108
Query: 362 LDFSNINGLQLTQPAT 409
LDF NI GLQLTQP T
Sbjct: 109 LDFHNIRGLQLTQPNT 124
Score = 83.8 bits (198), Expect = 8e-17
Identities = 39/56 (69%), Positives = 41/56 (73%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTH 56
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 117 bits (282), Expect = 5e-27
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M RL HSQVRGIS+KLQEEERERRD YVP VSALEQDIIEVD+DTK+MLK+
Sbjct: 49 KIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKL 108
Query: 362 LDFSNINGLQLTQPAT 409
LDF NI GLQLTQP T
Sbjct: 109 LDFHNIRGLQLTQPNT 124
Score = 83.8 bits (198), Expect = 8e-17
Identities = 39/56 (69%), Positives = 41/56 (73%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTH 56
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 117 bits (282), Expect = 5e-27
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M RL HSQVRGIS+KLQEEERERRD YVP VSALEQDIIEVD+DTK+MLK+
Sbjct: 49 KIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKL 108
Query: 362 LDFSNINGLQLTQPAT 409
LDF NI GLQLTQP T
Sbjct: 109 LDFHNIRGLQLTQPNT 124
Score = 83.8 bits (198), Expect = 8e-17
Identities = 39/56 (69%), Positives = 41/56 (73%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTH 56
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 117 bits (282), Expect = 5e-27
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = +2
Query: 182 KLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKM 361
K+ G M RL HSQVRGIS+KLQEEERERRD YVP VSALEQDIIEVD+DTK+MLK+
Sbjct: 49 KIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKL 108
Query: 362 LDFSNINGLQLTQPAT 409
LDF NI GLQLTQP T
Sbjct: 109 LDFHNIRGLQLTQPNT 124
Score = 83.8 bits (198), Expect = 8e-17
Identities = 39/56 (69%), Positives = 41/56 (73%)
Frame = +1
Query: 37 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 204
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ TH
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTH 56
>Y10229-1|CAA71278.1| 784|Drosophila melanogaster RAD54 protein.
Length = 784
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 107 LLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDK 286
+LL+ PI+ + + S L++ ++LG+ +F R + +RG + E+ER+R +
Sbjct: 322 VLLSGTPIQNDLTEYYS-LVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIE 380
Query: 287 YVPEVSALEQDII 325
E+ L I
Sbjct: 381 KTQELIGLVDQCI 393
>AY069599-1|AAL39744.2| 788|Drosophila melanogaster LD35220p
protein.
Length = 788
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 107 LLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDK 286
+LL+ PI+ + + S L++ ++LG+ +F R + +RG + E+ER+R +
Sbjct: 326 VLLSGTPIQNDLTEYYS-LVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIE 384
Query: 287 YVPEVSALEQDII 325
E+ L I
Sbjct: 385 KTQELIGLVDQCI 397
>AF069780-1|AAC26857.1| 628|Drosophila melanogaster RAD54 DNA
repair protein protein.
Length = 628
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 107 LLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDK 286
+LL+ PI+ + + S L++ ++LG+ +F R + +RG + E+ER+R +
Sbjct: 166 VLLSGTPIQNDLTEYYS-LVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIE 224
Query: 287 YVPEVSALEQDII 325
E+ L I
Sbjct: 225 KTQELIGLVDQCI 237
>AF069779-1|AAC24577.1| 784|Drosophila melanogaster Rad54 homolog
OKR protein.
Length = 784
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 107 LLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDK 286
+LL+ PI+ + + S L++ ++LG+ +F R + +RG + E+ER+R +
Sbjct: 322 VLLSGTPIQNDLTEYYS-LVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIE 380
Query: 287 YVPEVSALEQDII 325
E+ L I
Sbjct: 381 KTQELIGLVDQCI 393
>AE014134-530|AAF51168.1| 784|Drosophila melanogaster CG3736-PA
protein.
Length = 784
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 107 LLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPIFMRRLIHSQVRGISVKLQEEERERRDK 286
+LL+ PI+ + + S L++ ++LG+ +F R + +RG + E+ER+R +
Sbjct: 322 VLLSGTPIQNDLTEYYS-LVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIE 380
Query: 287 YVPEVSALEQDII 325
E+ L I
Sbjct: 381 KTQELIGLVDQCI 393
>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
protein.
Length = 2346
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/40 (25%), Positives = 27/40 (67%)
Frame = +2
Query: 245 SVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKML 364
++KL++EE++ DK+ E++++ +++ E + ++ K L
Sbjct: 874 AIKLKDEEKQLADKWQAELTSVREELAEKVNKVNELSKKL 913
>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
protein.
Length = 2346
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/40 (25%), Positives = 27/40 (67%)
Frame = +2
Query: 245 SVKLQEEERERRDKYVPEVSALEQDIIEVDSDTKDMLKML 364
++KL++EE++ DK+ E++++ +++ E + ++ K L
Sbjct: 874 AIKLKDEEKQLADKWQAELTSVREELAEKVNKVNELSKKL 913
>DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.
Length = 2765
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 266 ERERRDKYVPEVSALEQDIIEVDSDTKD 349
ER R +P++S L+QD ++V TKD
Sbjct: 1924 ERVRDGLNLPDISHLKQDSLDVSESTKD 1951
>AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA
protein.
Length = 2958
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 266 ERERRDKYVPEVSALEQDIIEVDSDTKD 349
ER R +P++S L+QD ++V TKD
Sbjct: 2117 ERVRDGLNLPDISHLKQDSLDVSESTKD 2144
>AY459353-1|AAR88134.1| 519|Drosophila melanogaster CYP6G2 protein.
Length = 519
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 213 LIKMGGEPSNFVAKRLSRNDSNFLTYPFIGIEVKSKPSVVFFDYNLRR 70
L+ M P+ F+++ + D+ PF+GI V KP+++ D + R
Sbjct: 47 LLNMRMSPAEFISQLYNHPDAE--NEPFVGIHVFHKPALLLRDPEMVR 92
>AE013599-1417|AAF58556.1| 519|Drosophila melanogaster CG8859-PA
protein.
Length = 519
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 213 LIKMGGEPSNFVAKRLSRNDSNFLTYPFIGIEVKSKPSVVFFDYNLRR 70
L+ M P+ F+++ + D+ PF+GI V KP+++ D + R
Sbjct: 47 LLNMRMSPAEFISQLYNHPDAE--NEPFVGIHVFHKPALLLRDPEMVR 92
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,542,418
Number of Sequences: 53049
Number of extensions: 333653
Number of successful extensions: 957
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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