Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I13
         (192 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   1.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   1.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   1.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   3.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   3.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    19   7.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    19   7.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    19   7.1  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 117 TLAFIVLYIFSFLFEV 164
           TLA  VL++ SFLF +
Sbjct: 9   TLAVNVLFVNSFLFVI 24


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 117 TLAFIVLYIFSFLFEV 164
           TLA  VL++ SFLF +
Sbjct: 9   TLAVNVLFVNSFLFVI 24


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 117 TLAFIVLYIFSFLFEV 164
           TLA  VL++ SFLF +
Sbjct: 9   TLAVNVLFVNSFLFVI 24


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 151 FYLRSLLVYW 180
           +Y+R +L YW
Sbjct: 235 YYMREMLPYW 244



 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 69  EKNAFNFYVRSIAP 28
           E NA+ +Y+R + P
Sbjct: 229 ELNAYYYYMREMLP 242


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 151 FYLRSLLVYW 180
           +Y+R +L YW
Sbjct: 235 YYMREMLPYW 244



 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 69  EKNAFNFYVRSIAP 28
           E NA+ +Y+R + P
Sbjct: 229 ELNAYYYYMREMLP 242


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 103 EYISIDFDIKERKK 62
           +Y+  DFD  ER++
Sbjct: 43  KYLDYDFDNDERRQ 56


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 139 IFSPFYLRSLLVYWF 183
           +F  F+L   + YWF
Sbjct: 430 VFPLFFLAINVFYWF 444


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 132 VLYIFSFLFEVV-TGLLV*G 188
           +L+IF+F+F V   G+L  G
Sbjct: 11  LLFIFNFVFAVCGLGILTLG 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,868
Number of Sequences: 438
Number of extensions: 872
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)