Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I12
(259 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 96 2e-20
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 96 2e-20
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 96 2e-20
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 96 2e-20
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 96 2e-20
BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembr... 28 6.2
AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein. 28 6.2
AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2... 28 6.2
AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1... 28 6.2
AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein. 28 6.2
BC051715-1|AAH51715.1| 828|Homo sapiens neuroligin 3 protein. 27 8.2
AJ243650-1|CAB59980.1| 324|Homo sapiens putative metal transpor... 27 8.2
AJ243649-1|CAB59979.1| 324|Homo sapiens putative metal transpor... 27 8.2
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDA 255
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+G GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
>BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6B
protein.
Length = 888
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 PPLSIAPREQKSHLRVFRG 208
PPLS+APR+ +H VF G
Sbjct: 32 PPLSVAPRDYLNHYPVFVG 50
>AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 PPLSIAPREQKSHLRVFRG 208
PPLS+APR+ +H VF G
Sbjct: 32 PPLSVAPRDYLNHYPVFVG 50
>AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2
protein.
Length = 687
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 PPLSIAPREQKSHLRVFRG 208
PPLS+APR+ +H VF G
Sbjct: 32 PPLSVAPRDYLNHYPVFVG 50
>AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1
protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 PPLSIAPREQKSHLRVFRG 208
PPLS+APR+ +H VF G
Sbjct: 32 PPLSVAPRDYLNHYPVFVG 50
>AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 152 PPLSIAPREQKSHLRVFRG 208
PPLS+APR+ +H VF G
Sbjct: 32 PPLSVAPRDYLNHYPVFVG 50
>BC051715-1|AAH51715.1| 828|Homo sapiens neuroligin 3 protein.
Length = 828
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 119 RRPCSPRDKWAPPLSIAPREQKSHLRV 199
R+P R WAP L AP E+ + L++
Sbjct: 722 RQPSPQRGAWAPELGAAPEEELAALQL 748
>AJ243650-1|CAB59980.1| 324|Homo sapiens putative metal transporter
protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 252 ITISLEISKGDLKXTPLKTLRCDFCSLGAIDKGGA-HLSLGEHGRRFNIVPVFTG 91
+ + LE+ G L + TL C S+G + + GA H + ++V F G
Sbjct: 23 VPVGLEVKLGALVLLLVLTLLCSLGSIGVLRRTGANHEGSASRQKALSLVSCFAG 77
>AJ243649-1|CAB59979.1| 324|Homo sapiens putative metal transporter
protein.
Length = 324
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 252 ITISLEISKGDLKXTPLKTLRCDFCSLGAIDKGGA-HLSLGEHGRRFNIVPVFTG 91
+ + LE+ G L + TL C S+G + + GA H + ++V F G
Sbjct: 23 VPVGLEVKLGALVLLLVLTLLCSLGSIGVLRRTGANHEGSASRQKALSLVSCFAG 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,961,770
Number of Sequences: 237096
Number of extensions: 676927
Number of successful extensions: 1276
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 76,859,062
effective HSP length: 63
effective length of database: 61,922,014
effective search space used: 1362284308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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