Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I12
(259 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 95 5e-21
U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 25 5.6
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF025457-2|AAB70965.2| 195|Caenorhabditis elegans Hypothetical ... 25 7.4
Z93375-1|CAB07563.1| 328|Caenorhabditis elegans Hypothetical pr... 25 9.8
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 95.5 bits (227), Expect = 5e-21
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = +1
Query: 79 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGF*GRVFEVSLADLQADSDAE 258
VDPF+RK+WYD+KAP+MF RQVG TL+NRTQGTKIASEG GRVFEVSL DL +S+A+
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLN-NSEAD 78
>U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical
protein T14B4.8 protein.
Length = 235
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 188 AIFVPWVRLTRVVPTCLLVNMDGALTSYQSLRVKG 84
+ F+P++R R VPT +++ +G + Y +L G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 119 RRPCSPRDKWAPPLSIAPREQK 184
R P ++ + PP I PREQK
Sbjct: 86 RMPSKIKEAFIPPAKITPREQK 107
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 119 RRPCSPRDKWAPPLSIAPREQK 184
R P ++ + PP I PREQK
Sbjct: 86 RMPSKIKEAFIPPAKITPREQK 107
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 119 RRPCSPRDKWAPPLSIAPREQK 184
R P ++ + PP I PREQK
Sbjct: 86 RMPSKIKEAFIPPAKITPREQK 107
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 119 RRPCSPRDKWAPPLSIAPREQK 184
R P ++ + PP I PREQK
Sbjct: 86 RMPSKIKEAFIPPAKITPREQK 107
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 256 PHHYQPGDQQGRPQXHAPKNPQ 191
PHHYQ QQ + Q ++PQ
Sbjct: 500 PHHYQQQQQQQQYQQQHQQSPQ 521
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 174 LGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRK 40
+G++D H+SL E RR + + IN+ L SFR+
Sbjct: 70 IGSLDNTNIHMSLDEFMRRPMVRQLAKENGINDKLFMRSFKSFRE 114
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 174 LGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRK 40
+G++D H+SL E RR + + IN+ L SFR+
Sbjct: 72 IGSLDNTNIHMSLDEFMRRPMVRQLAKENGINDKLFMRSFKSFRE 116
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 241 PGDQQGRPQXHAPKNPQMRFLFPG 170
PG G PQ P PQMR PG
Sbjct: 151 PGPSPGGPQPPGPGQPQMRPGQPG 174
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 241 PGDQQGRPQXHAPKNPQMRFLFPG 170
PG G PQ P PQMR PG
Sbjct: 151 PGPSPGGPQPPGPGQPQMRPGQPG 174
>AF025457-2|AAB70965.2| 195|Caenorhabditis elegans Hypothetical
protein C08E3.4 protein.
Length = 195
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 111 IVPVFTGERINNLLLNTLLASFRKAFIFTDRHDQ 10
++P+F ER+ L+LN L K I D+ Q
Sbjct: 59 LLPIFPAERLKKLILNGLDGQEYKQLIDLDQWKQ 92
>Z93375-1|CAB07563.1| 328|Caenorhabditis elegans Hypothetical
protein C38C6.3 protein.
Length = 328
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 259 FPHHYQPGDQQGRPQXHAPKNPQMRF 182
+P YQ D +GRP + K F
Sbjct: 140 YPSRYQNADDEGRPAGYGQKQKNGNF 165
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 89 SPVKTGTMLKRRPCSPRDKWAPPLSIAPREQKS 187
+P KT LKRR +P D IAP +K+
Sbjct: 155 TPKKTPKSLKRRALTPSDDEEEAGPIAPEPKKT 187
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 207 PLKTLRC---DFCSLGAIDKGGAHLSLGEHGRRFNIV 106
P+ L C D +L +D+ G ++LG+ G +NI+
Sbjct: 109 PIADLTCVGGDMATLDYLDQNGDIITLGDGGDDYNIL 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,424,374
Number of Sequences: 27780
Number of extensions: 96459
Number of successful extensions: 231
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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