Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I09
(194 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 80 1e-14
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 79 2e-14
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 78 3e-14
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 73 2e-12
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 67 8e-11
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 67 8e-11
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 65 2e-10
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 51 6e-06
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 47 7e-05
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 44 5e-04
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 42 0.003
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 36 0.17
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 36 0.17
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 35 0.30
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 33 1.2
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 33 1.2
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 33 1.6
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 32 2.8
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 31 6.5
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 79.8 bits (188), Expect = 1e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
MGFVKVVKNKQYFKR+QVKF RRREGKTDYYARKRL+VQ
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQ 39
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 79.0 bits (186), Expect = 2e-14
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
MGFVKVVKNK YFKRYQVKF RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ 39
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
MGFVKVVKNKQYFKRYQVKF RRREGKTDYYARKRL Q
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQ 39
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 72.5 bits (170), Expect = 2e-12
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
MG VKV+KNK YFKRYQVK RRREGKTDYYARKRL VQ
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQ 39
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 66.9 bits (156), Expect = 8e-11
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
M +VKVVKNK YFKRYQVK+ RRREGKTDY ARK L++Q
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQ 39
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 66.9 bits (156), Expect = 8e-11
Identities = 29/40 (72%), Positives = 37/40 (92%)
Frame = +1
Query: 73 KMGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
+M FVKVVKNK YFKR+QVK+ RRREGKTDY+AR+++V+Q
Sbjct: 23 EMPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQ 62
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 65.3 bits (152), Expect = 2e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
M FVK+VK YFKR+Q KF RRREGKTDYYAR RL+VQ
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQ 39
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
+ FVK K + Y KR+QVKF RRR GKTDY AR RL+ Q
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQ 50
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 47.2 bits (107), Expect = 7e-05
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +1
Query: 88 KVVKNKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
K+VKN YF R+Q KF RRRE KTDY R +L+ Q
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQ 38
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 44.4 bits (100), Expect = 5e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +1
Query: 76 MGFVKVVKNKQYFKRYQVKF*RRREGKTDYY 168
+GFVKV+K K YFKR+Q K+ RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKY-RRRRGKQLYY 42
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 109 YFKRYQVKF*RRREGKTDYYARKRLVVQ 192
+ + Q+K + +G TDYYARKRL++Q
Sbjct: 303 FLQSIQIK--QNYQGLTDYYARKRLIIQ 328
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 91 VVKNKQYFKRYQVKF*RRREG--KTDYYARKRLVVQ 192
V K Y RYQVKF RRR G KTDY AR+RL+ Q
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQ 48
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 35.9 bits (79), Expect = 0.17
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 124 QVKF*RRREGKTDYYARKRLVVQ 192
+++F R +EGKTDYYARKRL +Q
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQ 58
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 103 KQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
+ Y K +QVK RRREGKTDY R ++ Q
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQ 33
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 35.1 bits (77), Expect = 0.30
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 118 RYQVKF*RRREGKTDYYARKRLV 186
RY+V RRREGKT+YY R RLV
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV 28
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 100 NKQYFKRYQVKF*RRREGKTDYYARKRLVVQ 192
N Y R+++K RRR GKTDY R +L+ Q
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQ 39
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 118 RYQVKF*RRREGKTDYYARKRLV 186
RY V F RR EGKTDYY R L+
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL 28
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 118 RYQVKF*RRREGKTDYYARKRLVV 189
RY+V F RRREG+T+Y+ R +L++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLL 29
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 121 YQVKF*RRREGKTDYYARKRLV 186
Y+V+F RRREGKT+Y R +LV
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLV 28
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 118 RYQVKF*RRREGKTDYYARKRLV 186
RY+V RRRE +TDY+ R RL+
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL 28
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,475,817
Number of Sequences: 1657284
Number of extensions: 2510139
Number of successful extensions: 4653
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4652
length of database: 575,637,011
effective HSP length: 44
effective length of database: 502,716,515
effective search space used: 10054330300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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