Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I06
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 103 3e-23
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 40 3e-04
Z68751-5|CAA92975.1| 468|Caenorhabditis elegans Hypothetical pr... 27 1.9
AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical ... 27 1.9
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z78412-4|CAB01654.2| 211|Caenorhabditis elegans Hypothetical pr... 26 4.4
U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epiderm... 26 4.4
U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epiderm... 26 4.4
U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epiderm... 26 4.4
AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like ... 26 4.4
AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like ... 26 4.4
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 26 4.4
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 26 4.4
Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z32682-4|CAA83612.1| 218|Caenorhabditis elegans Hypothetical pr... 26 5.8
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 26 5.8
U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 25 7.6
AF000298-6|AAC48262.1| 340|Caenorhabditis elegans Seven tm rece... 25 7.6
AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical... 25 7.6
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 103 bits (246), Expect = 3e-23
Identities = 48/70 (68%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 PDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRKQRKER 202
PD V FGF++ GGGKS GFAL+YDT+D AKKFEPK+RL R GL K ++P RKQRKER
Sbjct: 52 PDTVIPFGFESKIGGGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRKER 111
Query: 203 KNRMKNVRGT 232
KNR K VRGT
Sbjct: 112 KNRQKKVRGT 121
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 39.9 bits (89), Expect = 3e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 83 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 211
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>Z68751-5|CAA92975.1| 468|Caenorhabditis elegans Hypothetical
protein T05E11.5 protein.
Length = 468
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 270 HHFLAAAPTLDFLVPRTFFILFL 202
HHF AA P L +LVP F+ L
Sbjct: 410 HHFKAAQPALLYLVPCCLFVPLL 432
>AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical
protein Y51A2A.6 protein.
Length = 140
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +2
Query: 50 FKTNFGGGKSTGFALI----YDTLDLAKKFEPKHRLARHGLYEKKRPTRKQR 193
F N GGGK+ GF+ + + KK H HG + RPTR R
Sbjct: 21 FVKNNGGGKNHGFSSASSSSSSSSEEGKKHGHGHHHHNHGRPSRPRPTRPPR 72
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 96 IKANPVDLPPPKFVLKPNTKTTSGP 22
+K P+ P PK LKP TK P
Sbjct: 270 LKPKPMPFPKPKPKLKPKTKPKKNP 294
>Z78412-4|CAB01654.2| 211|Caenorhabditis elegans Hypothetical
protein M176.5 protein.
Length = 211
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 95 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKNVRGT 232
I+D AK F + + + KKR R+ ++E + R N R T
Sbjct: 114 IHDKFKFAKNFSSEELTSTSPVSRKKRSARRNKREAR-RNSNSRAT 158
>U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform b protein.
Length = 772
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 EPKHRLARHGLYEKKRPTRKQRKERKNRMKNVRG 229
E ++ L L E+K RK + +K M+NVRG
Sbjct: 568 EQENALVMEKLMEQKMEDRKIIQSQKKAMRNVRG 601
>U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform a protein.
Length = 775
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 EPKHRLARHGLYEKKRPTRKQRKERKNRMKNVRG 229
E ++ L L E+K RK + +K M+NVRG
Sbjct: 568 EQENALVMEKLMEQKMEDRKIIQSQKKAMRNVRG 601
>U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform c protein.
Length = 777
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 EPKHRLARHGLYEKKRPTRKQRKERKNRMKNVRG 229
E ++ L L E+K RK + +K M+NVRG
Sbjct: 570 EQENALVMEKLMEQKMEDRKIIQSQKKAMRNVRG 603
>AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like
protein ZEN-4b protein.
Length = 772
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 EPKHRLARHGLYEKKRPTRKQRKERKNRMKNVRG 229
E ++ L L E+K RK + +K M+NVRG
Sbjct: 568 EQENALVMEKLMEQKMEDRKIIQSQKKAMRNVRG 601
>AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like
protein ZEN-4a protein.
Length = 775
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 EPKHRLARHGLYEKKRPTRKQRKERKNRMKNVRG 229
E ++ L L E+K RK + +K M+NVRG
Sbjct: 568 EQENALVMEKLMEQKMEDRKIIQSQKKAMRNVRG 601
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 95 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 217
I LD KK E KHR A+ +K+ ++Q K+ K +K
Sbjct: 17 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELK 56
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 95 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 217
I LD KK E KHR A+ +K+ ++Q K+ K +K
Sbjct: 64 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELK 103
>Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical
protein E04D5.2 protein.
Length = 404
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 294 IYLQS*PSHHFLAAAPTLDFLVPRTFFILF 205
++ +S PS FLA T D L+ T+ +LF
Sbjct: 53 VFRRSLPSSIFLATLATCDMLICLTYTLLF 82
>Z32682-4|CAA83612.1| 218|Caenorhabditis elegans Hypothetical
protein M04D8.4 protein.
Length = 218
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 286 TILTVTSLLGGRTYFRFLGTSYILHSVLTFL 194
T + V SL+G R Y G S+ ++SV FL
Sbjct: 129 TQILVKSLIGSRVYIAIFG-SFFINSVFGFL 158
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 113 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKNVR 226
L K+ + + +L + EKK+ + ++KERK K R
Sbjct: 125 LEKQRKKEKKLKKKAKKEKKKAKKLEKKERKKERKEKR 162
>U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical
protein C01G8.6 protein.
Length = 344
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 135 FGSNFFAKSSVS*IKANPVDLPPPKFVLKPNTKTT 31
+ S A SV+ NP PPP V K N K T
Sbjct: 270 YASTVTASPSVASYSPNPSQPPPPVAVAKLNMKMT 304
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 98 YDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKNVR 226
+DT KF + HG+Y K P + K +KN+R
Sbjct: 90 HDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTNVPKFNLKNLR 132
>AF000298-6|AAC48262.1| 340|Caenorhabditis elegans Seven tm
receptor protein 122 protein.
Length = 340
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 254 PHLL*ISWYLVHSSFC 207
P ++ I WYLVH FC
Sbjct: 137 PIIITILWYLVHGYFC 152
>AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical
protein Y54G2A.50 protein.
Length = 152
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 32 VVFVFGFKTNFGGGK 76
+VF+FGF+ FG G+
Sbjct: 115 IVFIFGFERRFGDGR 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,926,331
Number of Sequences: 27780
Number of extensions: 129887
Number of successful extensions: 469
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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