Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I06
         (300 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   1.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   5.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   5.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   7.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   7.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 53  KTNFGGGKSTGFALIYDTLDLA 118
           KTN  G  S+G  L+ +  D+A
Sbjct: 724 KTNLSGDSSSGTTLLLELDDIA 745


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 3   LQEFGHEGQT*FSCSVSRRTSVVANR 80
           L+  G EG+  + C++  +T  V  R
Sbjct: 81  LRSHGKEGEDPYRCNICGKTFAVPAR 106


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 28  RRSFRVRFQDELRWWQIDRICF 93
           +R+  +    + + W IDR CF
Sbjct: 175 KRTATITAATDCQLWAIDRQCF 196


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -3

Query: 250 TYFRFLGTSYILHSV 206
           TY  +LG +Y+++++
Sbjct: 656 TYICYLGKAYLMYAI 670


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 48  PNTKTTSGPRARIPAA 1
           P T TT+G    +PAA
Sbjct: 216 PATVTTTGATTTLPAA 231



 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 176 PTRKQRKERKN 208
           PTR+ RK R+N
Sbjct: 262 PTRRLRKRRQN 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,643
Number of Sequences: 438
Number of extensions: 1634
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)