Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_I05
(158 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein. 27 2.7
U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein... 27 3.5
AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein. 27 3.5
AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865071-2|AAW79474.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 27 3.5
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 27 3.5
AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein. 27 3.5
AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 27 3.5
AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein. 27 3.5
AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein. 27 3.5
AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein. 27 3.5
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 27 3.5
AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein. 27 3.5
AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein. 27 3.5
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 27 3.5
AY349700-1|AAQ75559.1| 601|Drosophila melanogaster Sr-CI protein. 27 3.5
AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger re... 27 3.5
AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA ... 27 3.5
AE013599-2526|AAF57819.2| 524|Drosophila melanogaster CG30106-P... 27 4.7
BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p pro... 26 8.1
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro... 26 8.1
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ... 26 8.1
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P... 26 8.1
>AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSLDLDNGSINYRQ 37
>U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein
precursor protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein.
Length = 630
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYR 154
L + ++ CIGH+H + C+R D NG NYR
Sbjct: 7 LAVIVIYCIGHIHGR------CERSLDLDNGSINYR 36
>AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYR 154
L + ++ CIGH+H + C+R D NG NYR
Sbjct: 7 LAVIVIYCIGHIHGR------CERSLDLDNGSINYR 36
>AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865071-2|AAW79474.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYR 154
L + ++ CIGH+H + C+R D NG NYR
Sbjct: 7 LAVIVIYCIGHIHGR------CERSLDLDNGSINYR 36
>AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYR 154
L + ++ CIGH+H + C+R D NG NYR
Sbjct: 7 LAVIVIYCIGHIHGR------CERSLDLDNGSINYR 36
>AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYR 154
L + ++ CIGH+H + C+R D NG NYR
Sbjct: 7 LAVIVIYCIGHIHGR------CERSLDLDNGSINYR 36
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 6 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 36
>AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 6 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 36
>AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 6 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 36
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 6 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 36
>AY349700-1|AAQ75559.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYR 154
L + ++ CIGH+H + C+R D NG NYR
Sbjct: 6 LAVIVIYCIGHIHGR------CERSLDLDNGSINYR 35
>AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger
receptor protein CIprecursor protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA
protein.
Length = 629
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 LILAMVVCIGHVHSKSLLNLSCKRIRDFVNGH-NYRR 157
L + ++ CIGH+H + C+R D NG NYR+
Sbjct: 7 LAVIVIYCIGHIHGR------CERSIDLDNGSINYRQ 37
>AE013599-2526|AAF57819.2| 524|Drosophila melanogaster CG30106-PA
protein.
Length = 524
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 15 VHTTEQWPYARFLFWQWSYVLDTSI-VSLY 101
V+T E WPY FL ++ D SI VS++
Sbjct: 141 VYTVEYWPYGSFLCSLSEFMKDVSIGVSVF 170
>BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p
protein.
Length = 563
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANESEI 131
W Y L S+ +LY TC S++
Sbjct: 242 WKYALRPSVETLYFTCFTQHSQV 264
>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
protein.
Length = 1075
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANESEI 131
W Y L S+ +LY TC S++
Sbjct: 448 WKYALRPSVETLYFTCFTQHSQV 470
>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
protein 11 protein.
Length = 1075
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANESEI 131
W Y L S+ +LY TC S++
Sbjct: 448 WKYALRPSVETLYFTCFTQHSQV 470
>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
protein.
Length = 1075
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANESEI 131
W Y L S+ +LY TC S++
Sbjct: 448 WKYALRPSVETLYFTCFTQHSQV 470
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,356,430
Number of Sequences: 53049
Number of extensions: 105429
Number of successful extensions: 455
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 24,988,368
effective HSP length: 33
effective length of database: 23,237,751
effective search space used: 441517269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -