Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_I02
         (213 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   1.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   3.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   3.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    19   5.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   6.7  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 65  ELNKLQAWLLHTM 103
           EL K+  W LH M
Sbjct: 272 ELTKIDKWFLHKM 284


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 97  YYADLGKKANDVFSKGYHLGVFKLDLKT 180
           YY  L ++ + +F   YH   F +  KT
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKT 127


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 97  YYADLGKKANDVFSKGYHLGVFKLDLKT 180
           YY  L ++ + +F   YH   F +  KT
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKT 127


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 160 FKLDLKTKSESGVEFTS 210
           F+LDL+ + E+G + +S
Sbjct: 174 FQLDLQLQDEAGGDISS 190


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -2

Query: 98  YGGAMPEVYLILK*NCLIIVNFRQIADN 15
           YGG    ++L+++     ++NF  +  N
Sbjct: 128 YGGNSTIIFLLIRFKSFSLLNFNLLFFN 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,596
Number of Sequences: 438
Number of extensions: 963
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)