Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H24
         (173 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058546-1|AAL13775.1|  418|Drosophila melanogaster LD24527p pro...    26   6.1  
AE014297-707|AAF54199.1|  418|Drosophila melanogaster CG9638-PA,...    26   6.1  

>AY058546-1|AAL13775.1|  418|Drosophila melanogaster LD24527p
           protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 135 LHCLVH*SSHELQHGA*EQCIITRRH 58
           LHC+++  ++E  +G+  QC+ T  H
Sbjct: 331 LHCIINAPNNERSNGSIRQCLTTGPH 356


>AE014297-707|AAF54199.1|  418|Drosophila melanogaster CG9638-PA,
           isoform A protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 135 LHCLVH*SSHELQHGA*EQCIITRRH 58
           LHC+++  ++E  +G+  QC+ T  H
Sbjct: 331 LHCIINAPNNERSNGSIRQCLTTGPH 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,595,074
Number of Sequences: 53049
Number of extensions: 83932
Number of successful extensions: 100
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 24,988,368
effective HSP length: 38
effective length of database: 22,972,506
effective search space used: 436477614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)