Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H23
         (190 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   0.55 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   3.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    22   3.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    21   3.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            21   5.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    21   5.2  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    20   9.0  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 113 KNVPKNLTPIINTVHTIP 166
           K  P NL+P INT  T P
Sbjct: 434 KRAPPNLSPTINTPETDP 451


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 138 RSSILSIPYHSSFK 179
           RSS+++IP HS F+
Sbjct: 119 RSSLVTIPTHSHFQ 132


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 138 RSSILSIPYHSSFK 179
           RSS+++IP HS F+
Sbjct: 120 RSSLVTIPTHSHFQ 133


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 145 QYCPYHTIAVSRSES 189
           +YCPY +I++   ES
Sbjct: 358 EYCPYASISMRHLES 372


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 166 WYGMDSID 143
           WYG DS+D
Sbjct: 12  WYGYDSVD 19


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 31   KTDCTLTKKFHLNERNITQGISFLFSRQKRAKK 129
            K +  L K  H+N++ + Q +SF   ++K  K+
Sbjct: 970  KANQHLKKYNHVNKKALDQFLSFSEQKEKLYKR 1002


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = -2

Query: 39  ICFSPYVMF 13
           +C+SPY++F
Sbjct: 465 LCWSPYIIF 473


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,829
Number of Sequences: 2352
Number of extensions: 3051
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 41
effective length of database: 467,547
effective search space used:  9818487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)