BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_H20
(256 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022171-1|AAY51565.1| 890|Drosophila melanogaster IP01285p pro... 27 4.6
BT011386-1|AAR96178.1| 285|Drosophila melanogaster HL08122p pro... 27 4.6
BT001752-1|AAN71507.1| 780|Drosophila melanogaster RH03424p pro... 27 4.6
AE013599-2111|AAM70963.2| 1082|Drosophila melanogaster CG30084-P... 27 4.6
AE013599-2108|ABI31098.1| 890|Drosophila melanogaster CG30084-P... 27 4.6
AE013599-2107|AAZ52805.1| 780|Drosophila melanogaster CG30084-P... 27 4.6
>BT022171-1|AAY51565.1| 890|Drosophila melanogaster IP01285p
protein.
Length = 890
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 NNFSG-NDYNQQNYSGPATNYYNMY*QAPPMNNAGKFGA 246
NN+S N YN NYS N N+Y + +AG FGA
Sbjct: 657 NNYSSSNSYNNNNYSNYNNN--NVY-RGAGGKSAGAFGA 692
>BT011386-1|AAR96178.1| 285|Drosophila melanogaster HL08122p
protein.
Length = 285
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 NNFSG-NDYNQQNYSGPATNYYNMY*QAPPMNNAGKFGA 246
NN+S N YN NYS N N+Y + +AG FGA
Sbjct: 52 NNYSSSNSYNNNNYSNYNNN--NVY-RGAGGKSAGAFGA 87
>BT001752-1|AAN71507.1| 780|Drosophila melanogaster RH03424p
protein.
Length = 780
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 NNFSG-NDYNQQNYSGPATNYYNMY*QAPPMNNAGKFGA 246
NN+S N YN NYS N N+Y + +AG FGA
Sbjct: 547 NNYSSSNSYNNNNYSNYNNN--NVY-RGAGGKSAGAFGA 582
>AE013599-2111|AAM70963.2| 1082|Drosophila melanogaster CG30084-PC,
isoform C protein.
Length = 1082
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 NNFSG-NDYNQQNYSGPATNYYNMY*QAPPMNNAGKFGA 246
NN+S N YN NYS N N+Y + +AG FGA
Sbjct: 849 NNYSSSNSYNNNNYSNYNNN--NVY-RGAGGKSAGAFGA 884
>AE013599-2108|ABI31098.1| 890|Drosophila melanogaster CG30084-PG,
isoform G protein.
Length = 890
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 NNFSG-NDYNQQNYSGPATNYYNMY*QAPPMNNAGKFGA 246
NN+S N YN NYS N N+Y + +AG FGA
Sbjct: 657 NNYSSSNSYNNNNYSNYNNN--NVY-RGAGGKSAGAFGA 692
>AE013599-2107|AAZ52805.1| 780|Drosophila melanogaster CG30084-PE,
isoform E protein.
Length = 780
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 NNFSG-NDYNQQNYSGPATNYYNMY*QAPPMNNAGKFGA 246
NN+S N YN NYS N N+Y + +AG FGA
Sbjct: 547 NNYSSSNSYNNNNYSNYNNN--NVY-RGAGGKSAGAFGA 582
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,295,193
Number of Sequences: 53049
Number of extensions: 73274
Number of successful extensions: 232
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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