Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H15
         (270 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   2.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   3.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    21   6.1  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 128 PLILYCKIWR 157
           P ++YC++WR
Sbjct: 98  PHVIYCRVWR 107


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 36  SHRLRHRHGLQVLRVVRLRM 95
           +H   H HGL++LR+   R+
Sbjct: 881 NHTFDHLHGLKILRLDHNRL 900


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 161  TPRISRRRSVNKL 199
            +PR  RRR VN+L
Sbjct: 1084 SPRTERRREVNRL 1096


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,052
Number of Sequences: 2352
Number of extensions: 2607
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)