Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_H15
(270 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont... 29 2.7
BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein. 29 2.7
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein. 29 2.7
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein... 29 2.7
BC089415-1|AAH89415.1| 446|Homo sapiens CEP110 protein protein. 28 6.1
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 28 6.1
AL137068-1|CAI12355.1| 452|Homo sapiens centrosomal protein 110... 28 6.1
AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens ... 28 6.1
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 28 6.1
AK094577-1|BAC04379.1| 207|Homo sapiens protein ( Homo sapiens ... 27 8.1
>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
containing 88A protein.
Length = 1843
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 LQDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKEGSDSM 267
LQDLE Q QK + E IS + E NK+L++ + +
Sbjct: 786 LQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQL 827
>BC078168-1|AAH78168.1| 887|Homo sapiens CCDC88A protein protein.
Length = 887
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 LQDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKEGSDSM 267
LQDLE Q QK + E IS + E NK+L++ + +
Sbjct: 783 LQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQL 824
>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
Length = 1870
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 LQDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKEGSDSM 267
LQDLE Q QK + E IS + E NK+L++ + +
Sbjct: 786 LQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQL 827
>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
protein.
Length = 1843
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 LQDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKEGSDSM 267
LQDLE Q QK + E IS + E NK+L++ + +
Sbjct: 786 LQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQL 827
>BC089415-1|AAH89415.1| 446|Homo sapiens CEP110 protein protein.
Length = 446
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 145 QDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKE 252
+DLEK + ++ S+Q + KN + LNK+LKE
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE 312
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 145 QDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKE 252
+DLEK + ++ S+Q + KN + LNK+LKE
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE 312
>AL137068-1|CAI12355.1| 452|Homo sapiens centrosomal protein 110kDa
protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 145 QDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKE 252
+DLEK + ++ S+Q + KN + LNK+LKE
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE 312
>AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens
cDNA FLJ46219 fis, clone TESTI4013742, moderately
similar to Mus musculus antigen identified by monoclonal
antibody ).
Length = 1185
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 145 QDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKE 252
+DLEK + ++ S+Q + KN + LNK+LKE
Sbjct: 110 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE 145
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 145 QDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKE 252
+DLEK + ++ S+Q + KN + LNK+LKE
Sbjct: 277 RDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKE 312
>AK094577-1|BAC04379.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ37258 fis, clone BRAMY2010208. ).
Length = 207
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 167 WACFSRSCNIVL 132
WACFSRSC ++L
Sbjct: 153 WACFSRSCVLIL 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,990,012
Number of Sequences: 237096
Number of extensions: 458236
Number of successful extensions: 1260
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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