Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_H15
(270 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 25 5.6
U39999-10|AAA81108.2| 306|Caenorhabditis elegans Serpentine rec... 25 5.6
Z82272-1|CAB05218.1| 341|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z82272-9|CAB05224.1| 341|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81146-8|CAB03527.1| 341|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 25 9.7
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 25 9.7
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 25 9.7
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 25 9.7
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 25 9.7
U23523-1|AAC46560.2| 305|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical ... 25 9.7
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 25 9.7
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 261 VGAFLQRFVQALRVL*VDD*NNLFTDR 181
VG F + +ALR L V+D NNL T++
Sbjct: 175 VGDFAGYYREALRYLGVEDANNLTTEQ 201
>U39999-10|AAA81108.2| 306|Caenorhabditis elegans Serpentine
receptor, class x protein95 protein.
Length = 306
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 236 FKLSVFFELTTEITCSLIVFWKSWACFSRSCNIV 135
F S+ + +TCSL+ FW A F+R N+V
Sbjct: 52 FIFSISKAFSNILTCSLVFFWLVPAVFARD-NLV 84
>Z82272-1|CAB05218.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.2 protein.
Length = 341
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 124 DAPNTILQDLEKHAQDFQKTISEQVISVVNSKNTESLNKALKEGS 258
D+ N I + + + Q +Q I++VN + + S NK L +GS
Sbjct: 194 DSANYIASLYQLYQKKVQWRTIQQNINIVNLEASRSNNKVLLQGS 238
>Z82272-9|CAB05224.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.4 protein.
Length = 341
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 175 QKTISEQVISVVNSKNTESLNKALKEGS 258
Q T S+ I VVN + + S+NK L +GS
Sbjct: 211 QWTSSQDGIVVVNVEASRSMNKLLIQGS 238
>Z81146-8|CAB03527.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.4 protein.
Length = 341
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 175 QKTISEQVISVVNSKNTESLNKALKEGS 258
Q T S+ I VVN + + S+NK L +GS
Sbjct: 211 QWTSSQDGIVVVNVEASRSMNKLLIQGS 238
>Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical
protein C55A6.2 protein.
Length = 677
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +1
Query: 139 ILQDLEKHAQDFQKTISEQVISVVNSKNTESLNKA 243
+++DL +DF + + ++V++ N+KN+ +KA
Sbjct: 521 VMEDLGN--EDFDERLFDEVVTKKNTKNSSGSSKA 553
>Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical
protein C16C2.4 protein.
Length = 357
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 133 NTILQDLEKHAQDFQKTISEQ 195
NT+L DL K +F+K + E+
Sbjct: 114 NTMLGDLNKEQDEFEKQLQEE 134
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 251 SFSALFKLSVFFELTTEITCSLIVFWKSWACFSRSCNIVLGAS 123
SFS ++ + V T I CSLIV+ F +CN + A+
Sbjct: 245 SFSIMYMIPVAVWWGT-IMCSLIVYLSFAWLFGATCNFAMFAA 286
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = -2
Query: 257 EPSFSALFKLSVFFEL------TTEITCSLI 183
+P+FS + ++ FFE+ TE+TC L+
Sbjct: 213 DPTFSMFYSIAFFFEIPSFVLKLTEMTCFLV 243
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = -2
Query: 257 EPSFSALFKLSVFFEL------TTEITCSLI 183
+P+FS + ++ FFE+ TE+TC L+
Sbjct: 213 DPTFSMFYSIAFFFEIPSFVLKLTEMTCFLV 243
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = -2
Query: 257 EPSFSALFKLSVFFEL------TTEITCSLI 183
+P+FS + ++ FFE+ TE+TC L+
Sbjct: 213 DPTFSMFYSIAFFFEIPSFVLKLTEMTCFLV 243
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = -2
Query: 257 EPSFSALFKLSVFFEL------TTEITCSLI 183
+P+FS + ++ FFE+ TE+TC L+
Sbjct: 213 DPTFSMFYSIAFFFEIPSFVLKLTEMTCFLV 243
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = -2
Query: 257 EPSFSALFKLSVFFEL------TTEITCSLI 183
+P+FS + ++ FFE+ TE+TC L+
Sbjct: 213 DPTFSMFYSIAFFFEIPSFVLKLTEMTCFLV 243
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 79 LFACVCLAHGAMVRRDAPNTILQDLEKHAQD 171
+ +C HG MVRR+ ++ E+ A+D
Sbjct: 838 IMKALCPVHGYMVRRNYDYSVSNSEEEDAED 868
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 79 LFACVCLAHGAMVRRDAPNTILQDLEKHAQD 171
+ +C HG MVRR+ ++ E+ A+D
Sbjct: 800 IMKALCPVHGYMVRRNYDYSVSNSEEEDAED 830
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/45 (20%), Positives = 20/45 (44%)
Frame = -2
Query: 266 MESEPSFSALFKLSVFFELTTEITCSLIVFWKSWACFSRSCNIVL 132
+E P+F +F + + E+ + + W C R+C ++
Sbjct: 2 IELGPTFKTIFSIGAIVLWSIELFLAFAQSVRPWICILRTCLYII 46
>U23523-1|AAC46560.2| 305|Caenorhabditis elegans Hypothetical
protein F53A9.5 protein.
Length = 305
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 248 FSALFKLSVFFELTTE 201
FS LFK +FFELT +
Sbjct: 178 FSILFKAPMFFELTND 193
>AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical
protein Y48A6B.8 protein.
Length = 551
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 148 DLEKHAQD--FQKTISEQVISVVNSKNTESLNKALKEGSDS 264
D+ +H Q+ QKT+ EQ+ S V +++ + +K+G ++
Sbjct: 208 DVFQHLQNRAVQKTMIEQLESAVRNQDVMEMGNVVKKGLEN 248
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = -2
Query: 257 EPSFSALFKLSVFFEL------TTEITCSLI 183
+P+FS + ++ FFE+ TE+TC L+
Sbjct: 213 DPTFSMFYSIAFFFEIPSFVLKLTEMTCFLV 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,799,474
Number of Sequences: 27780
Number of extensions: 73448
Number of successful extensions: 269
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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