Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_H12
(278 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0168 + 27165323-27165373,27166659-27167067,27167666-271677... 29 0.70
07_03_1760 - 29289997-29290377,29290539-29290755,29291152-292939... 28 1.2
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 27 1.6
08_01_0017 + 132109-132924 27 2.1
06_03_0056 - 16046535-16047309,16047625-16048784,16049233-160493... 27 2.1
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 27 2.8
01_01_0930 + 7347680-7347886,7348030-7348082,7348175-7348247,734... 27 2.8
12_01_0221 + 1671231-1671349,1671613-1671745,1672011-1672190,167... 26 3.7
11_01_0220 + 1717861-1717979,1718149-1718281,1718544-1718723,171... 26 3.7
02_04_0240 - 21194597-21194743,21195579-21195680,21195797-211958... 26 3.7
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 26 3.7
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 26 4.9
08_02_1454 - 27222004-27222296,27222389-27222500 26 4.9
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 26 4.9
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 26 4.9
08_02_1395 - 26737972-26738418,26738505-26738738,26738887-267391... 25 6.5
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 25 6.5
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 25 6.5
04_04_1376 + 33058306-33059763,33059851-33059991,33060594-330606... 25 6.5
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 25 6.5
02_03_0061 + 14582724-14582840,14583360-14584334 25 6.5
02_01_0759 - 5628913-5630870,5631023-5631047 25 6.5
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 25 6.5
10_08_0333 - 16850267-16851802 25 8.6
07_03_0046 + 12781335-12782073,12782254-12783014 25 8.6
>01_06_0168 +
27165323-27165373,27166659-27167067,27167666-27167793,
27167905-27167964,27169126-27169275,27169358-27169513,
27169643-27169854,27169983-27170084,27170351-27170430,
27170515-27170939
Length = 590
Score = 28.7 bits (61), Expect = 0.70
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -3
Query: 207 KNRITVSYDQDHIRSPRAMDSQSISVTSPPRILLPDTLPQHLPSRSGGKA--VTALEQLT 34
KN V D+ H+ PR S + + +PQ +P R+G A V E L+
Sbjct: 407 KNGDAVPSDRKHVSLPRTTTVHSAPIPPKDHQNITSQVPQRIPGRTGRGACPVIPFENLS 466
Query: 33 SGG 25
+ G
Sbjct: 467 AMG 469
>07_03_1760 -
29289997-29290377,29290539-29290755,29291152-29293953,
29294134-29294178,29294274-29294358,29294791-29294875,
29296429-29296530,29296747-29296851,29296940-29297029,
29297163-29297258
Length = 1335
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 62 FPPERDGKCCGRVSGNKILGGEVT 133
FPPE G C R+S N +GG T
Sbjct: 883 FPPENAGSCPKRLSTNTNMGGPET 906
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 168 RSPRAMDSQSISVTSPPRILLPDTLPQHLPSRSGGKAVTALEQLTSG 28
R+P Q +S PP P T PQH+P + G +Q G
Sbjct: 138 RAPYQQQQQQMS-QQPPAHQYPSTHPQHMPYQHGHYMQPQQQQFQQG 183
>08_01_0017 + 132109-132924
Length = 271
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 97 SSTALAIAFWWESCDSSRAVNFR 29
SS+A A A+ W SC R ++FR
Sbjct: 48 SSSAAAAAWQWPSCKQPRTLSFR 70
>06_03_0056 -
16046535-16047309,16047625-16048784,16049233-16049340,
16049487-16049672,16050342-16050398
Length = 761
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = -2
Query: 175 SYSITTSHG*SVDLCDLTAENFITGHSSTALAIA 74
SYS+++ H S L T ++++ HSS+++A++
Sbjct: 353 SYSVSSLHNISAPLVAGTKRDYMSDHSSSSVALS 386
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 251 TQCAPVSYILRTDERKTA*QCPMTKIIFDHHEPWI 147
+Q P I+R K C FDHH PWI
Sbjct: 371 SQLCPTCKIIRPMRSKHCPTCKHCVEQFDHHCPWI 405
>01_01_0930 +
7347680-7347886,7348030-7348082,7348175-7348247,
7348493-7348594,7348697-7348798,7348888-7348959,
7349067-7349129,7349210-7349251,7349620-7349679,
7349755-7349865,7350044-7350214,7350392-7350482,
7350571-7350845
Length = 473
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 23 PPPEVNCSRAVTAFPPERDGKCCGRV 100
P C V A PP RDG C V
Sbjct: 180 PAQIAGCKTVVLATPPSRDGSICKEV 205
>12_01_0221 +
1671231-1671349,1671613-1671745,1672011-1672190,
1672632-1672712,1672850-1673013,1673109-1673245,
1673492-1673607,1673725-1673958
Length = 387
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 102 DTLPQHLPSRSGGKAVTALEQLTS 31
D + +HL +SG K TAL +LT+
Sbjct: 364 DYISKHLGRQSGSKTTTALRKLTT 387
>11_01_0220 +
1717861-1717979,1718149-1718281,1718544-1718723,
1719046-1719126,1719259-1719422,1719518-1719654,
1719900-1720015,1720134-1720367
Length = 387
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 102 DTLPQHLPSRSGGKAVTALEQLTS 31
D + +HL +SG K TAL +LT+
Sbjct: 364 DYISKHLGRQSGSKTTTALRKLTT 387
>02_04_0240 -
21194597-21194743,21195579-21195680,21195797-21195875,
21195921-21196043,21196135-21196193,21196453-21196974,
21197434-21198177,21198426-21198506
Length = 618
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 205 KPHNSVL*PRSYSITTSHG*SVDLCDLTAENFITGH 98
+PH +V PR+ SH V L + T + F+T H
Sbjct: 394 EPHGAVSLPRAAVNKGSHVSHVALSNSTTQKFVTSH 429
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 168 RSPRAMDSQSISVTSPPRILLP-DTLPQHLPSRSGGKAVTALEQLTSGGGSQHKPSC 1
+SP + S+ ++ + +LP DT + SGGK++ E++ SG + SC
Sbjct: 124 KSPESDSSEGGNIEVNEQCMLPVDTSAAEI---SGGKSIDVDEEVLSGNSEKPSDSC 177
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 170 FDHHEPWIVSRSL*PHRREFYYRTLFHST 84
FDHH PW V + + F+Y +F +T
Sbjct: 149 FDHHCPW-VGQCIGRRNYRFFYMFVFSTT 176
>08_02_1454 - 27222004-27222296,27222389-27222500
Length = 134
Score = 25.8 bits (54), Expect = 4.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 141 SISVTSPPRI---LLPDTLPQHLPSRSGGKAVTALEQLTSGGGS 19
++ + PPR+ LLP P LPS S A L + GGGS
Sbjct: 78 AMGLRPPPRLRDLLLPPPAPHPLPSSSSSPA-KILTGSSGGGGS 120
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 120 PRILLPDTLPQHL-PSRSGGKAVTALEQLTSGGG 22
PR+L PD LP L P+ S + + +GGG
Sbjct: 97 PRLLAPDALPAELFPTHSSVEYALPPDAAEAGGG 130
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 168 RSPRAMDSQSISVTSPPRILLPDTLPQHLPSRSGGKAVT 52
R+ D I V +PP +P PQ P ++G +AVT
Sbjct: 196 RNQAQADKAPIPV-APPGAAVPPAQPQPQPPQAGAEAVT 233
>08_02_1395 -
26737972-26738418,26738505-26738738,26738887-26739183,
26739399-26739581,26739778-26739834,26739960-26740016,
26740228-26740322,26740714-26740765,26740821-26740910
Length = 503
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 170 FDHHEPWIVSRSL*PHRREFYYRTLFHST 84
FDHH PW V + + F+Y +F +T
Sbjct: 264 FDHHCPW-VGQCIGLRNYRFFYMFVFSTT 291
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 81 PSRSGGKAVT-ALEQLTSGGGSQHKPSC 1
P+ +GGK V+ ++++T GGG+ + C
Sbjct: 157 PNDTGGKTVSEVIKEMTGGGGADYCFEC 184
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 162 PRAMDSQSISVTSPPRILLPDTLPQHLPSRSGGKAVTALEQLTSGGGSQ 16
P + + + + + P R+ P L PSR G V A + GGS+
Sbjct: 6 PHSPRAAAAAPSVPSRLPRPFLLSLSSPSRGGSGLVAASASAVAAGGSE 54
>04_04_1376 +
33058306-33059763,33059851-33059991,33060594-33060644,
33061094-33061171,33061245-33061388,33061871-33062002
Length = 667
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 174 HIRSPRAMDSQSISVTSPPRILLPDTLPQHLPSRSGGKAVTALEQLTSGGGSQH 13
+I S S S ++ SP +L+P TL + LP A + GG+ +
Sbjct: 249 NIASSSHNPSPSTNLPSPNCLLVPSTLDEQLPRYGATTAGLSSSSYDPSGGNNN 302
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 93 PQHLPSRSGGKAVTALEQLTSGGGSQHKP 7
P H P A AL + SGGG + P
Sbjct: 50 PPHRPPTGSSSAAGALSRRASGGGGEMGP 78
>02_03_0061 + 14582724-14582840,14583360-14584334
Length = 363
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 20 DPPPEVNCSRAVTAFPP 70
DP PE+ ++ VTA PP
Sbjct: 290 DPLPEIESAKEVTAIPP 306
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 181 PRSYSITTSHG*SVDLCDLTAENFITGHSSTALAIAFWWESCD 53
P+S S + G S++ +L N I H+ +L WW CD
Sbjct: 617 PKSVSFLGNMGQSLEGLNLQFCNMIGNHNIASLEKQLWW--CD 657
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 170 FDHHEPWIVSRSL*PHRREFYYRTLFHST 84
FDHH PW V + + F+Y +F +T
Sbjct: 195 FDHHCPW-VGQCIGLRNYRFFYMFVFSTT 222
>10_08_0333 - 16850267-16851802
Length = 511
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 2 HEGLCCDPPPEVNCSRAVTAFPPERDGKCC 91
H C PP ++C+ A A ERD + C
Sbjct: 418 HNSGLCGPPLNISCTNASVA-SDERDCRTC 446
>07_03_0046 + 12781335-12782073,12782254-12783014
Length = 499
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 20 DPPPEVNCSRAVTAFPPER 76
DP PE+ + VTA PP +
Sbjct: 365 DPLPEIESAEEVTAVPPHK 383
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,447,686
Number of Sequences: 37544
Number of extensions: 169725
Number of successful extensions: 514
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 267635896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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