Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H12
         (278 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   1.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   1.6  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   3.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   3.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   4.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   8.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  NCSRAVTAFPPERDGKCCGRVSGNKIL 118
           N   A+T FP   DGK   RV  ++++
Sbjct: 165 NIRSAITIFPQRTDGKHDYRVWNHQLI 191


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 234 YRCTLCH 254
           Y+CTLCH
Sbjct: 260 YKCTLCH 266


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 177 LGHRTLLCGFSLISSKYVAYRCTLCHWQCL 266
           L HR + C      SK+++   + C  +CL
Sbjct: 57  LRHRRVTCDVLSWQSKWLSINHSACAIRCL 86


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 192 LLCGFSLISSKYV 230
           ++CG ++IS +YV
Sbjct: 186 MICGATIISKRYV 198


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 84  LPSRSGGKAVTALEQLTSGGGSQ 16
           LP+      V+ +E  TS GG++
Sbjct: 241 LPASPADSGVSDVESSTSSGGNE 263


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 38  NCSRAVTAFPPERD 79
           NC+  +T F P+ D
Sbjct: 183 NCNHLMTKFEPDLD 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,116
Number of Sequences: 438
Number of extensions: 1468
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)