Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H11
         (194 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    28   1.1  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    28   1.1  
Z81071-9|CAI79242.1|  177|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical pr...    27   1.4  
U97403-4|AAB52474.2|  445|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z81056-10|CAB02904.2|  301|Caenorhabditis elegans Hypothetical p...    25   7.4  
AL117200-9|CAB60586.1|  807|Caenorhabditis elegans Hypothetical ...    25   9.8  
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ...    25   9.8  

>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 44   CLKNSINYNCHRFCNTSYLNYIANVNSFKVHKIEKIRY 157
            C K+ +  +CH FC+ S     ++VNS  ++ ++ ++Y
Sbjct: 3023 CSKSLVPIHCHSFCDQS---QDSDVNSLSINHLQCVQY 3057


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 44   CLKNSINYNCHRFCNTSYLNYIANVNSFKVHKIEKIRY 157
            C K+ +  +CH FC+ S     ++VNS  ++ ++ ++Y
Sbjct: 3023 CSKSLVPIHCHSFCDQS---QDSDVNSLSINHLQCVQY 3057


>Z81071-9|CAI79242.1|  177|Caenorhabditis elegans Hypothetical
           protein F28F8.9 protein.
          Length = 177

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 104 YIANVNSFKVHKIEKIRYTEF 166
           Y  NV SFK+ KIEK +  EF
Sbjct: 32  YFKNVKSFKIPKIEKRKAEEF 52


>Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical
           protein F53B7.4 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 29  HEGVQCLKNSINYNCHRFCNTSYL 100
           +E ++C + S+ YNC ++C +S L
Sbjct: 133 YESIRCPEYSLCYNCSKYCFSSSL 156


>Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical
           protein ZK512.2 protein.
          Length = 578

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +2

Query: 38  VQCLKNSINYNCHRFCNTSYLNYIANVNSFKVHKIEKIR 154
           V  +++   ++CH  C+   LN +   NS+ + ++ K+R
Sbjct: 421 VSHVESYAKHDCHLICSLDDLNVVGLANSYALLRLPKMR 459


>U97403-4|AAB52474.2|  445|Caenorhabditis elegans Hypothetical
           protein T10E9.7a protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 59  INYNCHRFCNTSYLNYIANVNSFKVHKIEK 148
           +NY  HRF ++S L          ++KIEK
Sbjct: 6   LNYPIHRFLDSSLLGQFIGPEGSNIYKIEK 35


>Z81056-10|CAB02904.2|  301|Caenorhabditis elegans Hypothetical
           protein F09F3.4 protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 86  NTSYLNYIANVNSFKVHKIEKIRYTEFY 169
           N   LN+I NV    +H I+ I YT  Y
Sbjct: 213 NKWLLNFIQNVIQDALHVIDMINYTFIY 240


>AL117200-9|CAB60586.1|  807|Caenorhabditis elegans Hypothetical
           protein Y50E8A.16 protein.
          Length = 807

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 98  LNYIANVNSFKVHKIEKIRYT 160
           L+ I  V SF   KIE +RYT
Sbjct: 417 LSAIRTVRSFAAEKIENMRYT 437


>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
            protein R155.2 protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 50   KNSINYNCHRFCNTSYLNYIANVNSFKVHKIEK 148
            +N   ++  +F  TSY N +AN+ S +V  + K
Sbjct: 931  RNESTFDFMKFFKTSYENKVANMQSPEVSDLVK 963


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,621,511
Number of Sequences: 27780
Number of extensions: 75841
Number of successful extensions: 212
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 12,740,198
effective HSP length: 44
effective length of database: 11,517,878
effective search space used: 230357560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)