Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H10
         (197 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    69   7e-13
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    69   7e-13
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    69   7e-13
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    65   1e-11
AY061562-1|AAL29110.1|  249|Drosophila melanogaster LP11415p pro...    29   1.2  
AE014298-1718|AAF48118.1|  249|Drosophila melanogaster CG2471-PA...    29   1.2  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +3

Query: 78  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVE 197
           M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VE
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVE 40


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +3

Query: 78  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVE 197
           M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VE
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVE 40


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +3

Query: 78  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVE 197
           M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VE
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVE 40


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 65.3 bits (152), Expect = 1e-11
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = +3

Query: 78  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVE 197
           M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VE
Sbjct: 1   MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVE 40


>AY061562-1|AAL29110.1|  249|Drosophila melanogaster LP11415p
           protein.
          Length = 249

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 45  AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 170
           +F  L ++ FK+ S A L    +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215


>AE014298-1718|AAF48118.1|  249|Drosophila melanogaster CG2471-PA
           protein.
          Length = 249

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 45  AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 170
           +F  L ++ FK+ S A L    +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,908,141
Number of Sequences: 53049
Number of extensions: 118622
Number of successful extensions: 365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 24,988,368
effective HSP length: 45
effective length of database: 22,601,163
effective search space used: 452023260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)