Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_H09
(272 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 36 9e-05
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 36 9e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 2.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 3.7
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 20 4.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 4.8
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 19 8.4
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 19 8.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 19 8.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 19 8.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 19 8.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 19 8.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 19 8.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 19 8.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 19 8.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 19 8.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 19 8.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 8.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 19 8.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 19 8.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 19 8.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 19 8.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 19 8.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 8.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 19 8.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 35.9 bits (79), Expect = 9e-05
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 221 MSNLADPVAFAKDFLAG 271
MS LADPVAFAKDFLAG
Sbjct: 1 MSGLADPVAFAKDFLAG 17
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 35.9 bits (79), Expect = 9e-05
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 221 MSNLADPVAFAKDFLAG 271
MS LADPVAFAKDFLAG
Sbjct: 1 MSGLADPVAFAKDFLAG 17
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 2.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 88 DHEITPNLLIKNRGFVFRGFSIPCVPKSFLVRKYPP 195
D ++P I+NR + G S P + K+PP
Sbjct: 374 DLRMSPLPSIRNRSGLVSGSSTPGTGREHDPAKFPP 409
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.6 bits (41), Expect = 3.7
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -1
Query: 161 THGMEKPRKTNPRFLIRRFGVIS 93
THG P LIR G +S
Sbjct: 55 THGKGTPTVVKTNILIRSMGPVS 77
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 4.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 156 RNGKTTKNEP 127
RNGKTT+ P
Sbjct: 382 RNGKTTEENP 391
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 4.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 146 KPRKTNPRFLIRRFGVIS*SQEH 78
+P PR IR VI +QEH
Sbjct: 518 EPSACRPRHEIRSTDVIPGTQEH 540
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 19.4 bits (38), Expect = 8.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 190 DTCGQGRTSA 161
DTC QGR +A
Sbjct: 347 DTCCQGRATA 356
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 212 GFQHTSSRYSRERSCS 227
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 212 GFQHTSSRYSRERSCS 227
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 212 GFQHTSSRYSRERSCS 227
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 212 GFQHTSSRYSRERSCS 227
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 212 GFQHTSSRYSRERSCS 227
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 228 GFQHTSSRYSRERSCS 243
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.4 bits (38), Expect = 8.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 1 GFRHEPCRTARERDRS 48
GF+H R +RER S
Sbjct: 223 GFQHTSSRYSRERSCS 238
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,746
Number of Sequences: 438
Number of extensions: 1873
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5263398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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