Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_H08
(193 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L27706-1|AAA61061.1| 531|Homo sapiens chaperonin-like protein p... 78 4e-15
BC106942-1|AAI06943.1| 531|Homo sapiens chaperonin containing T... 78 4e-15
AF385084-1|AAK61354.1| 531|Homo sapiens heat shock protein prot... 78 4e-15
AB063318-1|BAB61032.1| 531|Homo sapiens acute morphine dependen... 78 4e-15
AB209728-1|BAD92965.1| 529|Homo sapiens chaperonin containing T... 75 5e-14
BC027591-1|AAH27591.1| 530|Homo sapiens chaperonin containing T... 72 3e-13
BC026125-1|AAH26125.1| 530|Homo sapiens chaperonin containing T... 72 3e-13
D78333-1|BAA11347.1| 540|Homo sapiens testis-specific TCP20 pro... 56 3e-08
X74801-1|CAA52808.1| 544|Homo sapiens gamma subunit of CCT chap... 36 0.030
BC008019-1|AAH08019.1| 544|Homo sapiens chaperonin containing T... 36 0.030
BC006501-1|AAH06501.3| 545|Homo sapiens chaperonin containing T... 36 0.030
AY524046-1|AAS94255.1| 545|Homo sapiens PIG48 protein. 36 0.030
AL589685-14|CAI14172.1| 276|Homo sapiens chaperonin containing ... 36 0.030
AL589685-12|CAI14170.1| 168|Homo sapiens chaperonin containing ... 36 0.030
AL589685-11|CAI14169.1| 161|Homo sapiens chaperonin containing ... 36 0.030
AL589685-10|CAI14167.1| 545|Homo sapiens chaperonin containing ... 36 0.030
AL589685-9|CAI14168.1| 522|Homo sapiens chaperonin containing T... 36 0.030
AB208882-1|BAD92119.1| 577|Homo sapiens chaperonin containing T... 36 0.030
U38846-1|AAC50384.1| 539|Homo sapiens stimulator of TAR RNA bin... 34 0.070
BC106934-1|AAI06935.1| 539|Homo sapiens chaperonin containing T... 34 0.070
BC106933-1|AAI06934.1| 539|Homo sapiens chaperonin containing T... 34 0.070
AF026291-1|AAC96010.1| 539|Homo sapiens chaperonin containing t... 34 0.070
AC107081-1|AAY24140.1| 539|Homo sapiens unknown protein. 34 0.070
D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein. 31 0.86
BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing T... 31 0.86
BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing T... 31 0.86
BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for IM... 31 0.86
CR456719-1|CAG33000.1| 543|Homo sapiens CCT7 protein. 29 2.0
X52882-1|CAA37064.1| 556|Homo sapiens t-complex polypeptide 1 p... 29 3.5
BT006969-1|AAP35615.1| 556|Homo sapiens t-complex 1 protein. 29 3.5
BC000665-1|AAH00665.1| 556|Homo sapiens t-complex 1 protein. 29 3.5
AL135914-7|CAI21851.1| 556|Homo sapiens t-complex 1 protein. 29 3.5
CR536511-1|CAG38749.1| 543|Homo sapiens CCT7 protein. 28 4.6
BC088351-1|AAH88351.1| 543|Homo sapiens chaperonin containing T... 28 4.6
BC019296-1|AAH19296.1| 543|Homo sapiens chaperonin containing T... 28 4.6
AK222478-1|BAD96198.1| 543|Homo sapiens chaperonin containing T... 28 4.6
AF026292-1|AAC96011.1| 543|Homo sapiens chaperonin containing t... 28 4.6
AC010913-3|AAX88902.1| 543|Homo sapiens unknown protein. 28 4.6
BC126450-1|AAI26451.1| 297|Homo sapiens coiled-coil domain cont... 28 6.1
BC126448-1|AAI26449.1| 297|Homo sapiens coiled-coil domain cont... 28 6.1
AK027247-1|BAB15706.1| 297|Homo sapiens protein ( Homo sapiens ... 28 6.1
>L27706-1|AAA61061.1| 531|Homo sapiens chaperonin-like protein
protein.
Length = 531
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAA+ LNPKAE+ARA ALAVNISAA+G+QDV++ NLGPKGTMKML
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKML 47
>BC106942-1|AAI06943.1| 531|Homo sapiens chaperonin containing
TCP1, subunit 6A (zeta 1) protein.
Length = 531
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAA+ LNPKAE+ARA ALAVNISAA+G+QDV++ NLGPKGTMKML
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKML 47
>AF385084-1|AAK61354.1| 531|Homo sapiens heat shock protein
protein.
Length = 531
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAA+ LNPKAE+ARA ALAVNISAA+G+QDV++ NLGPKGTMKML
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKML 47
>AB063318-1|BAB61032.1| 531|Homo sapiens acute morphine dependence
related protein 2 protein.
Length = 531
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAA+ LNPKAE+ARA ALAVNISAA+G+QDV++ NLGPKGTMKML
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKML 47
>AB209728-1|BAD92965.1| 529|Homo sapiens chaperonin containing
TCP1, subunit 6A isoform a variant protein.
Length = 529
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 57 AISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
A+ LNPKAE+ARA ALAVNISAA+G+QDV++ NLGPKGTMKML
Sbjct: 1 AVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKML 45
>BC027591-1|AAH27591.1| 530|Homo sapiens chaperonin containing
TCP1, subunit 6B (zeta 2) protein.
Length = 530
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAAI +N KAE+ARA ALAVNI AA+G+QDV++ NLGPKGTMKML
Sbjct: 1 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKML 47
>BC026125-1|AAH26125.1| 530|Homo sapiens chaperonin containing
TCP1, subunit 6B (zeta 2) protein.
Length = 530
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAAI +N KAE+ARA ALAVNI AA+G+QDV++ NLGPKGTMKML
Sbjct: 1 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKML 47
>D78333-1|BAA11347.1| 540|Homo sapiens testis-specific TCP20
protein.
Length = 540
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +3
Query: 51 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
MAAI +N KAE+ARA Q L ++I A +QDV++ NLGPKGTMKML
Sbjct: 1 MAAIKAVNSKAEVARARQ-LWLSIYAPPRVQDVLRTNLGPKGTMKML 46
>X74801-1|CAA52808.1| 544|Homo sapiens gamma subunit of CCT
chaperonin protein.
Length = 544
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 12 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 49
>BC008019-1|AAH08019.1| 544|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 544
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 12 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 49
>BC006501-1|AAH06501.3| 545|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 545
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 50
>AY524046-1|AAS94255.1| 545|Homo sapiens PIG48 protein.
Length = 545
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 50
>AL589685-14|CAI14172.1| 276|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 276
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 37 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 74
>AL589685-12|CAI14170.1| 168|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 168
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 50
>AL589685-11|CAI14169.1| 161|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 161
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 50
>AL589685-10|CAI14167.1| 545|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 545
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 50
>AL589685-9|CAI14168.1| 522|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 522
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 50
>AB208882-1|BAD92119.1| 577|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) variant protein.
Length = 577
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 72 NPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
N K E R Q+ NI+AAK I D+++ LGPK MKML
Sbjct: 45 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKML 82
>U38846-1|AAC50384.1| 539|Homo sapiens stimulator of TAR RNA
binding protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
NISAAK + D ++ +LGPKG KM+
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
>BC106934-1|AAI06935.1| 539|Homo sapiens chaperonin containing
TCP1, subunit 4 (delta) protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
NISAAK + D ++ +LGPKG KM+
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
>BC106933-1|AAI06934.1| 539|Homo sapiens chaperonin containing
TCP1, subunit 4 (delta) protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
NISAAK + D ++ +LGPKG KM+
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
>AF026291-1|AAC96010.1| 539|Homo sapiens chaperonin containing
t-complex polypeptide 1, delta subunit protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
NISAAK + D ++ +LGPKG KM+
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
>AC107081-1|AAY24140.1| 539|Homo sapiens unknown protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
NISAAK + D ++ +LGPKG KM+
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
>D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein.
Length = 553
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 102 QALAVNISAAKGIQDVMKANLGPKGTMKML 191
+AL +I AAK + + M+ +LGP G KM+
Sbjct: 44 EALKSHIMAAKAVANTMRTSLGPNGLDKMM 73
>BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 102 QALAVNISAAKGIQDVMKANLGPKGTMKML 191
+AL +I AAK + + M+ +LGP G KM+
Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMM 61
>BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 102 QALAVNISAAKGIQDVMKANLGPKGTMKML 191
+AL +I AAK + + M+ +LGP G KM+
Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMM 61
>BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for
IMAGE:3543711) protein.
Length = 539
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 102 QALAVNISAAKGIQDVMKANLGPKGTMKML 191
+AL +I AAK + + M+ +LGP G KM+
Sbjct: 30 EALKSHIMAAKAVANTMRTSLGPNGLDKMM 59
>CR456719-1|CAG33000.1| 543|Homo sapiens CCT7 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ + L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGTPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>X52882-1|CAA37064.1| 556|Homo sapiens t-complex polypeptide 1
protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
N+ AA I +++K++LGP G KML
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKML 45
>BT006969-1|AAP35615.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
N+ AA I +++K++LGP G KML
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKML 45
>BC000665-1|AAH00665.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
N+ AA I +++K++LGP G KML
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKML 45
>AL135914-7|CAI21851.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 117 NISAAKGIQDVMKANLGPKGTMKML 191
N+ AA I +++K++LGP G KML
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKML 45
>CR536511-1|CAG38749.1| 543|Homo sapiens CCT7 protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>BC088351-1|AAH88351.1| 543|Homo sapiens chaperonin containing
TCP1, subunit 7 (eta) protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>BC019296-1|AAH19296.1| 543|Homo sapiens chaperonin containing
TCP1, subunit 7 (eta) protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>AK222478-1|BAD96198.1| 543|Homo sapiens chaperonin containing
TCP1, subunit 7 (eta) variant protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>AF026292-1|AAC96011.1| 543|Homo sapiens chaperonin containing
t-complex polypeptide 1, eta subunit protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>AC010913-3|AAX88902.1| 543|Homo sapiens unknown protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 60 ISLLNPKAELARASQALAVNISAAKGIQDVMKANLGPKGTMKML 191
+ LL + ++ L NISA + I + ++ LGP+G K++
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 49
>BC126450-1|AAI26451.1| 297|Homo sapiens coiled-coil domain
containing 102B protein.
Length = 297
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 135 LWQLKYSQLKPVKPSQVQLWDLI 67
LW+ KY +LK KP V+ +D++
Sbjct: 78 LWKWKYEELKESKPKNVKEFDIL 100
>BC126448-1|AAI26449.1| 297|Homo sapiens coiled-coil domain
containing 102B protein.
Length = 297
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 135 LWQLKYSQLKPVKPSQVQLWDLI 67
LW+ KY +LK KP V+ +D++
Sbjct: 78 LWKWKYEELKESKPKNVKEFDIL 100
>AK027247-1|BAB15706.1| 297|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23594 fis, clone LNG14867. ).
Length = 297
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 135 LWQLKYSQLKPVKPSQVQLWDLI 67
LW+ KY +LK KP V+ +D++
Sbjct: 78 LWKWKYEELKESKPKNVKEFDIL 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,496,869
Number of Sequences: 237096
Number of extensions: 339471
Number of successful extensions: 4309
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4308
length of database: 76,859,062
effective HSP length: 43
effective length of database: 66,663,934
effective search space used: 1333278680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -