Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H06
         (328 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   0.72 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   1.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   2.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   2.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   6.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   6.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   6.8  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    21   8.9  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 115  PKIRIFDLGKKRATVDDFPLCVHLVSDEYELFSTEALE 228
            P I +++  KKRAT+ D  + V L  +    FST+ ++
Sbjct: 1103 PDILVYEKRKKRATI-DIDIAVTLDHNVQTTFSTKVMK 1139


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/64 (21%), Positives = 27/64 (42%)
 Frame = +1

Query: 67   KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYELFSTEALEAGRICC 246
            +NKP+    +   +P   +  ++        D F L   LV  +Y L+  ++     +  
Sbjct: 944  ENKPHVFDCYTTVIPHTVLTQYNYTVNTDEKDSFVLGYRLVKKKYHLYVKKSTGPHAVEL 1003

Query: 247  NKYL 258
            NKY+
Sbjct: 1004 NKYM 1007


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 73  YSYNIDNISLVGAPLC 26
           Y+Y +  + L G+PLC
Sbjct: 899 YAYQLHRMQLTGSPLC 914


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 136  LGKKRATVDDFPLCVHLVSDEYELFSTEALEAGRICCNKYL 258
            L   R TVD   +  HL+SD+ + F+   L   ++  N  L
Sbjct: 992  LPSSRITVDRSTIARHLLSDQSDPFNRSPLTMEQVKRNDEL 1032


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 244 CNKYLVKNCGKDQFHIR 294
           CN +  K CGK   HIR
Sbjct: 497 CNLHRCKLCGKVVTHIR 513


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -1

Query: 292  GC-GTDLYRSSLRGTCCNRYGLLP 224
            GC   D   S  +G+ CN+YG  P
Sbjct: 983  GCHACDCDPSGSKGSQCNQYGQCP 1006


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 104 VCLTQRSVFSTWAKRERQWMTSH 172
           +CLT+R +   +  R  +W   H
Sbjct: 317 LCLTERQIKIWFQNRRMKWKKEH 339


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 111 RHTPTKPRFRIRFILTISITSRWSAP 34
           R TP+ PR        +  +S WS P
Sbjct: 48  RSTPSSPRLAQASTCPVPCSSIWSRP 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,605
Number of Sequences: 2352
Number of extensions: 6895
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)