Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H03
         (180 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130304-1|AAI30305.1| 1125|Homo sapiens exportin 6 protein.           41   6e-04
BC108286-1|AAI08287.1|  941|Homo sapiens XPO6 protein protein.         41   6e-04
BC078674-1|AAH78674.1|  956|Homo sapiens XPO6 protein protein.         41   6e-04
BC014071-1|AAH14071.2|  888|Homo sapiens XPO6 protein protein.         41   6e-04
BC004403-1|AAH04403.1|  888|Homo sapiens XPO6 protein protein.         41   6e-04
AY026388-1|AAK01471.1| 1125|Homo sapiens exportin 6 protein.           41   6e-04
AK223043-1|BAD96763.1|  411|Homo sapiens exportin 6 variant prot...    41   6e-04
AB002368-1|BAA20825.3| 1132|Homo sapiens KIAA0370 protein protein.     41   6e-04
AK223072-1|BAD96792.1|  568|Homo sapiens kelch-like 12 variant p...    28   6.2  

>BC130304-1|AAI30305.1| 1125|Homo sapiens exportin 6 protein.
          Length = 1125

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11   DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
            D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 1091 DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 1123


>BC108286-1|AAI08287.1|  941|Homo sapiens XPO6 protein protein.
          Length = 941

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11   DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
            D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 907  DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 939


>BC078674-1|AAH78674.1|  956|Homo sapiens XPO6 protein protein.
          Length = 956

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11   DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
            D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 922  DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 954


>BC014071-1|AAH14071.2|  888|Homo sapiens XPO6 protein protein.
          Length = 888

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11  DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
           D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 854 DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 886


>BC004403-1|AAH04403.1|  888|Homo sapiens XPO6 protein protein.
          Length = 888

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11  DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
           D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 854 DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 886


>AY026388-1|AAK01471.1| 1125|Homo sapiens exportin 6 protein.
          Length = 1125

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11   DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
            D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 1091 DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 1123


>AK223043-1|BAD96763.1|  411|Homo sapiens exportin 6 variant
           protein.
          Length = 411

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11  DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
           D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 377 DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 409


>AB002368-1|BAA20825.3| 1132|Homo sapiens KIAA0370 protein protein.
          Length = 1132

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11   DTDLPTFTQNIHRLINDVNCYR-AYSALAPADV 106
            D DLP+FTQN+HRL+ND+  YR    +L P  V
Sbjct: 1098 DRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTV 1130


>AK223072-1|BAD96792.1|  568|Homo sapiens kelch-like 12 variant
           protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 7   GGHGSTDIHAE---YSPTDKRRELLPRVQRARSGRRQHVAFPIAYCRPINNTLVILNSV 174
           GG   +  HA    Y P   +  +L  +Q AR G    VA  + YC    + L ILNSV
Sbjct: 385 GGFDGSRRHASMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSV 443


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,895,570
Number of Sequences: 237096
Number of extensions: 321348
Number of successful extensions: 736
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 76,859,062
effective HSP length: 39
effective length of database: 67,612,318
effective search space used: 1352246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)