Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_H03
         (180 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    19   4.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   4.1  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    19   5.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   5.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    18   9.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              18   9.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    18   9.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    18   9.6  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
          protein.
          Length = 283

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 16 GSTDIHAEYSPTDKRRELLPRVQ 84
          G+T++     PT  RRE  P  +
Sbjct: 18 GNTNLDPPTRPTRLRREAKPEAE 40


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 35  QNIHRLINDVNCYRA 79
           +NI + +  +NCYR+
Sbjct: 470 KNIIKKLLQINCYRS 484


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
          protein.
          Length = 144

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 16 GSTDIHAEYSPTDKRRELLPRVQ 84
          G+T++     PT  RRE  P  +
Sbjct: 19 GNTNLDPPTRPTRLRREAEPEAE 41


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 47  RLINDVNCYR 76
           +L+N VNC R
Sbjct: 419 QLVNSVNCLR 428


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 47  RLINDVNCYR 76
           +L+N VNC R
Sbjct: 457 QLVNSVNCLR 466


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 39  FCVNVGRSVSASC 1
           FCVN+  S   +C
Sbjct: 289 FCVNIVTSYCKTC 301


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 100  RRQHVAFPIAYCRPINNTLVILNSVNI 180
            RRQH A  +    P + T   L S  I
Sbjct: 1072 RRQHTAEGVPEQPPHDTTCTTLTSQTI 1098


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 10  GHGSTDIHA 36
           GHG + IHA
Sbjct: 420 GHGHSHIHA 428


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 116 ATC*RRPERARCTRGNS 66
           A+C   PE   C+  NS
Sbjct: 161 ASCCNSPENNTCSISNS 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,072
Number of Sequences: 438
Number of extensions: 675
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)