Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G22
(254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 44 2e-05
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 32 0.065
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 30 0.26
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 27 1.8
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 27 1.8
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 27 1.8
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 27 1.8
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 27 1.8
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 26 3.2
U97405-7|AAB53006.1| 125|Caenorhabditis elegans Hypothetical pr... 26 3.2
M77697-9|AAA27904.1| 407|Caenorhabditis elegans Hypothetical pr... 26 3.2
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 26 4.3
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 25 9.8
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 25 9.8
AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical... 25 9.8
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 43.6 bits (98), Expect = 2e-05
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 109 CYFSNWAVYRPGVGRYGIEDIPVDMCTHMIYSF 207
CYF+NWA YR G ++ ED +CTH++++F
Sbjct: 57 CYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAF 89
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 31.9 bits (69), Expect = 0.065
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 124 WAVYRPGVGRYGIEDIPVDMCTHMIYSF 207
WA YR G ++ ED +CTH++++F
Sbjct: 1 WAQYRQGRAKFVPEDYTPGLCTHILFAF 28
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 29.9 bits (64), Expect = 0.26
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 240 EDLVSLLSDTDERVDHMSTHINRNILDAVTSYARPVHRPITEV 112
E + L++ V ++ T + I D+ S RP+ +PITE+
Sbjct: 579 EKTTAQLNERANAVSNIRTQMEEKIADSSNSKQRPISQPITEI 621
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 162 DAVTSYARPVHRPITEVANYTSSAIRLNRGREYRQDSQRRKYLSHFERRGVP 7
++VTS+ P I E+ + +R REY+ + YLS R VP
Sbjct: 115 ESVTSFEEPYVSYIKELWEDSGIQECYDRRREYQLTDSAKYYLSDLRRLAVP 166
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 162 DAVTSYARPVHRPITEVANYTSSAIRLNRGREYRQDSQRRKYLSHFERRGVP 7
++VTS+ P I E+ + +R REY+ + YLS R VP
Sbjct: 115 ESVTSFEEPYVSYIKELWEDSGIQECYDRRREYQLTDSAKYYLSDLRRLAVP 166
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 GRARVVCYFSNWAVYRPGVGRYGIEDIPVDMCTH--MIYSFIGVTEKTNEVLVIDP 252
G +V S Y GV +DI + + + + YSF+G K +EV++I+P
Sbjct: 73 GHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEP 128
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 162 DAVTSYARPVHRPITEVANYTSSAIRLNRGREYRQDSQRRKYLSHFERRGVP 7
++VTS+ P I E+ + +R REY+ + YLS R VP
Sbjct: 63 ESVTSFEEPYVSYIKELWEDSGIQECYDRRREYQLTDSAKYYLSDLRRLAVP 114
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 162 DAVTSYARPVHRPITEVANYTSSAIRLNRGREYRQDSQRRKYLSHFERRGVP 7
++VTS+ P I E+ + +R REY+ + YLS R VP
Sbjct: 115 ESVTSFEEPYVSYIKELWEDSGIQECYDRRREYQLTDSAKYYLSDLRRLAVP 166
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -3
Query: 246 NDEDLVSLLSDT---DERVDHMSTHINRNILDAVTSYARPVHRPITEVANYTSSAIRLNR 76
N+ +L++ L T ++ +T + T+ A+PV PIT + TS+ L
Sbjct: 199 NEPELMTTLETTTTSSKKSSEFTTTMTPESSSVTTTTAKPVTEPITTSTSSTSATTTLKT 258
Query: 75 GREYRQD 55
+ R +
Sbjct: 259 SSKIRDE 265
>U97405-7|AAB53006.1| 125|Caenorhabditis elegans Hypothetical
protein T09B4.3 protein.
Length = 125
Score = 26.2 bits (55), Expect = 3.2
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 202 SRSYEYTYQQEYPRCRNVLRQAGTP 128
S +Y+ T ++ P C +++ +AG+P
Sbjct: 7 SENYDETCEESPPECESIIFEAGSP 31
>M77697-9|AAA27904.1| 407|Caenorhabditis elegans Hypothetical
protein B0303.14 protein.
Length = 407
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 240 EDLVSLLSDTDERVDHMSTHINRNIL 163
ED++ +SD + R D + I RNIL
Sbjct: 143 EDIIDQISDLNVRNDRSAAQIKRNIL 168
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 25.8 bits (54), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -2
Query: 205 KSRSYEYTYQQEYPRCRN---VLRQAGTPPNY*SSKLHELCHPIEP 77
K Y Y+ ++Y +N VLR G P + +++ HPI P
Sbjct: 451 KPEPYGYSRDRDYGAPQNQHFVLRMRGVPFRASEADVYDFFHPIRP 496
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 193 MIYSFIGVTEKTNEVLVIDP 252
+ Y+F+G K +EVL+I+P
Sbjct: 109 LYYAFLGWVNKGDEVLIIEP 128
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 193 MIYSFIGVTEKTNEVLVIDP 252
+ Y+F+G K +EVL+I+P
Sbjct: 126 LYYAFLGWVNKGDEVLIIEP 145
>Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical
protein M110.3 protein.
Length = 189
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 115 FSNWAVYRPGVGRYGIEDIPVDM--CTHMIYSFIGVTEKTNEV 237
+ +W + R G+ ++G+ +I VD+ + F+G+ T +
Sbjct: 79 WKSWTIPRFGIDKFGLLEITVDLWITWRTVSGFVGMMNGTKGI 121
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -3
Query: 237 DLVSLLSDTDERVDHMSTHINRNILDAVTSYARPVHRPITEVANYTSSAIR 85
+ V + ++ +VD R ILD+ VHRP+ N T R
Sbjct: 165 EFVFMQAEAQYKVDKKRDRQERQILDSQERAFWDVHRPVPGCVNTTEVDFR 215
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -3
Query: 237 DLVSLLSDTDERVDHMSTHINRNILDAVTSYARPVHRPITEVANYTSSAIR 85
+ V + ++ +VD R ILD+ VHRP+ N T R
Sbjct: 165 EFVFMQAEAQYKVDKKRDRQERQILDSQERAFWDVHRPVPGCVNTTEVDFR 215
>AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical
protein C35E7.1 protein.
Length = 729
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Frame = -2
Query: 202 SRSYEY-----TYQQEYPRCRNVLRQAGTP 128
S SYEY T QQEY + RN+L + P
Sbjct: 626 SDSYEYDKVMKTLQQEYDQLRNILSKYQKP 655
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,711,791
Number of Sequences: 27780
Number of extensions: 106688
Number of successful extensions: 288
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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