Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G21
(303 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101476-1|AAI01477.1| 1015|Homo sapiens non-SMC condensin I com... 46 2e-05
BC068467-1|AAH68467.1| 1015|Homo sapiens non-SMC condensin I com... 46 2e-05
BC000827-1|AAH00827.1| 435|Homo sapiens NCAPG protein protein. 46 2e-05
AK027511-1|BAB55165.1| 524|Homo sapiens protein ( Homo sapiens ... 46 2e-05
AK023147-1|BAB14429.1| 960|Homo sapiens protein ( Homo sapiens ... 46 2e-05
AK022512-1|BAB14069.1| 1015|Homo sapiens protein ( Homo sapiens ... 46 2e-05
AF331796-1|AAG49627.1| 1015|Homo sapiens condensin subunit CAP-G... 46 2e-05
AF235023-1|AAG30732.1| 1015|Homo sapiens chromosome condensation... 46 2e-05
AB013299-1|BAB21557.1| 1015|Homo sapiens chromosome-associated p... 46 2e-05
BC132983-1|AAI32984.1| 313|Homo sapiens leucine rich repeat con... 27 8.1
BC132981-1|AAI32982.1| 313|Homo sapiens leucine rich repeat con... 27 8.1
AL157714-2|CAI15338.1| 313|Homo sapiens novel protein protein. 27 8.1
AK098677-1|BAC05375.1| 313|Homo sapiens protein ( Homo sapiens ... 27 8.1
>BC101476-1|AAI01477.1| 1015|Homo sapiens non-SMC condensin I complex,
subunit G protein.
Length = 1015
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 836 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 874
>BC068467-1|AAH68467.1| 1015|Homo sapiens non-SMC condensin I complex,
subunit G protein.
Length = 1015
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 836 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 874
>BC000827-1|AAH00827.1| 435|Homo sapiens NCAPG protein protein.
Length = 435
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 196 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 255
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 256 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 294
>AK027511-1|BAB55165.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ14605 fis, clone NT2RP1000439, weakly similar to
Xenopus laevis chromosome condensation protein XCAP-G
mRNA. ).
Length = 524
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 285 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 344
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 345 DEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 383
>AK023147-1|BAB14429.1| 960|Homo sapiens protein ( Homo sapiens cDNA
FLJ13085 fis, clone NT2RP3002081, moderately similar to
Xenopus laevis chromosome condensation protein XCAP-G ).
Length = 960
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 721 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 780
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 781 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 819
>AK022512-1|BAB14069.1| 1015|Homo sapiens protein ( Homo sapiens cDNA
FLJ12450 fis, clone NT2RM1000354, moderately similar to
Xenopus laevis chromosome condensation protein XCAP-G ).
Length = 1015
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 836 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 874
>AF331796-1|AAG49627.1| 1015|Homo sapiens condensin subunit CAP-G
protein.
Length = 1015
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 836 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 874
>AF235023-1|AAG30732.1| 1015|Homo sapiens chromosome condensation
protein G protein.
Length = 1015
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 836 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 874
>AB013299-1|BAB21557.1| 1015|Homo sapiens chromosome-associated
protein-G protein.
Length = 1015
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Frame = +2
Query: 23 PTLRTLANARSSSPLAEIDQEAVVRFIASLTR---VNNELADSQ--------AGMATVVC 169
PTL+TLANA +SSPLAEID V + LTR +N + SQ +A +C
Sbjct: 776 PTLQTLANAPASSPLAEIDITNVAELLVDLTRPSGLNPQAKTSQDYQALTVHDNLAMKIC 835
Query: 170 QYIVRHPTASEVGLACRLLALLSPPRDVHLAFELANMLRDL 292
I+ P + E+ + + AL S HLA +L +L ++
Sbjct: 836 NEILTSPCSPEIRVYTK--ALSSLELSSHLAKDLLVLLNEI 874
>BC132983-1|AAI32984.1| 313|Homo sapiens leucine rich repeat
containing 52 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 221 SGTRVP--LLMRSGDALCTGTQQSPYPLD 141
SG++ P L ++ + +CTG Q + YPLD
Sbjct: 22 SGSKCPNNCLCQAQEVICTGKQLTEYPLD 50
>BC132981-1|AAI32982.1| 313|Homo sapiens leucine rich repeat
containing 52 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 221 SGTRVP--LLMRSGDALCTGTQQSPYPLD 141
SG++ P L ++ + +CTG Q + YPLD
Sbjct: 22 SGSKCPNNCLCQAQEVICTGKQLTEYPLD 50
>AL157714-2|CAI15338.1| 313|Homo sapiens novel protein protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 221 SGTRVP--LLMRSGDALCTGTQQSPYPLD 141
SG++ P L ++ + +CTG Q + YPLD
Sbjct: 22 SGSKCPNNCLCQAQEVICTGKQLTEYPLD 50
>AK098677-1|BAC05375.1| 313|Homo sapiens protein ( Homo sapiens
cDNA FLJ25811 fis, clone TST07369. ).
Length = 313
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 221 SGTRVP--LLMRSGDALCTGTQQSPYPLD 141
SG++ P L ++ + +CTG Q + YPLD
Sbjct: 22 SGSKCPNNCLCQAQEVICTGKQLTEYPLD 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,158,812
Number of Sequences: 237096
Number of extensions: 720417
Number of successful extensions: 1774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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