Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G21
(303 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 30 0.37
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 30 0.37
AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical ... 27 3.4
AC084197-35|AAN63424.1| 505|Caenorhabditis elegans Puf (pumilio... 27 3.4
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 26 4.5
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical pr... 26 4.5
U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor pro... 26 4.5
AL031627-1|CAA20945.1| 550|Caenorhabditis elegans Hypothetical ... 26 6.0
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 0.37
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -1
Query: 297 IDKSRSMLASSKARCTSRGGDSSASKRH-ASPTSDAVG*RTMYWHTTVAIPA*LSANSLL 121
+DK ++M +S + TSRG +S + H +S T+ +V R V I +S +
Sbjct: 509 LDK-KAMCPTSSSPSTSRGSQASPAPSHTSSSTTSSVHLRETVARNGVPIKETMSLRDVG 567
Query: 120 TLVREAMNL 94
L R+A+NL
Sbjct: 568 PLSRDALNL 576
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 29.9 bits (64), Expect = 0.37
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -1
Query: 297 IDKSRSMLASSKARCTSRGGDSSASKRH-ASPTSDAVG*RTMYWHTTVAIPA*LSANSLL 121
+DK ++M +S + TSRG +S + H +S T+ +V R V I +S +
Sbjct: 509 LDK-KAMCPTSSSPSTSRGSQASPAPSHTSSSTTSSVHLRETVARNGVPIKETMSLRDVG 567
Query: 120 TLVREAMNL 94
L R+A+NL
Sbjct: 568 PLSRDALNL 576
>AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical
protein Y45F10A.2 protein.
Length = 502
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 212 ACRLLALLSPPRDVHLAFELANMLRD 289
ACR++ L DVHLA L+ LRD
Sbjct: 231 ACRVIQLAIQKLDVHLATRLSLELRD 256
>AC084197-35|AAN63424.1| 505|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 11 protein.
Length = 505
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 212 ACRLLALLSPPRDVHLAFELANMLRD 289
ACR++ L DVHLA L+ LRD
Sbjct: 234 ACRVIQLAIQKLDVHLATRLSLELRD 259
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 172 VHSASPDRIRSGTRVPL 222
VH PDRIR G +P+
Sbjct: 404 VHGVEPDRIREGCSIPI 420
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 132 NSLLTLVREAMNLTTASWSISAKGELDRAFANVRSVG 22
NSL+ L+ LTT SW + LD F+N G
Sbjct: 314 NSLVLLLFVCHLLTTYSWQFYSDSVLDEEFSNETLTG 350
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 132 NSLLTLVREAMNLTTASWSISAKGELDRAFANVRSVG 22
NSL+ L+ LTT SW + LD F+N G
Sbjct: 314 NSLVLLLFVCHLLTTYSWQFYSDSVLDEEFSNETLTG 350
>Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical
protein C33D3.1 protein.
Length = 433
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 273 ASSKARCTSRGGDSSASKRHASPTSDAVG*RTMYW 169
+S K+ ++RG + SAS+R S+ G T W
Sbjct: 214 SSKKSSSSNRGSNGSASRRQGLVCSNCNGTNTTLW 248
>U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor
protein.
Length = 433
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 273 ASSKARCTSRGGDSSASKRHASPTSDAVG*RTMYW 169
+S K+ ++RG + SAS+R S+ G T W
Sbjct: 214 SSKKSSSSNRGSNGSASRRQGLVCSNCNGTNTTLW 248
>AL031627-1|CAA20945.1| 550|Caenorhabditis elegans Hypothetical
protein Y102A5C.4 protein.
Length = 550
Score = 25.8 bits (54), Expect = 6.0
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 125 NELADSQAGMATVVCQYIVR---HPTASEVGLACRLLALLSPPRDVHLAFELANMLRDLS 295
N + +A A + Y+ R HP+ + R SP HL +LA+MLRD S
Sbjct: 221 NSKKNQEAATAVTLMTYMQRTISHPSKENIRNFLRECEKTSPG---HLGLKLAHMLRDTS 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,181,425
Number of Sequences: 27780
Number of extensions: 102174
Number of successful extensions: 342
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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