Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G21
         (303 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   4.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   5.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   7.7  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 279 MLASSKARCTSRGGDSSA 226
           ++A  KARC S  G + A
Sbjct: 37  LVAEDKARCMSEHGTTQA 54


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 279 MLASSKARCTSRGGDSSA 226
           ++A  KARC S  G + A
Sbjct: 37  LVAEDKARCMSEHGTTQA 54


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +2

Query: 17  RGP-TLRTLANARSSSPLA 70
           R P TLR +A  R ++PLA
Sbjct: 897 RSPDTLRKIAQNRGTNPLA 915


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 190 DRIRSGTRVP 219
           DR+R GTR P
Sbjct: 361 DRVRVGTRYP 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,068
Number of Sequences: 438
Number of extensions: 1211
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)