Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G19
         (206 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000155D461 Cluster: PREDICTED: similar to Mitogen-ac...    32   2.9  
UniRef50_Q8U4V0 Cluster: AGR_L_3054p; n=1; Agrobacterium tumefac...    31   3.9  
UniRef50_Q8N5C8 Cluster: Mitogen-activated protein kinase kinase...    31   3.9  
UniRef50_A0RRB7 Cluster: Putative uncharacterized protein; n=1; ...    30   9.0  
UniRef50_A2WQS7 Cluster: Putative uncharacterized protein; n=1; ...    30   9.0  

>UniRef50_UPI000155D461 Cluster: PREDICTED: similar to
           Mitogen-activated protein kinase kinase kinase 7
           interacting protein 3; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to Mitogen-activated
           protein kinase kinase kinase 7 interacting protein 3 -
           Ornithorhynchus anatinus
          Length = 639

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +3

Query: 36  MQRTIRRVSCTDAVQQSKK-TKQRIASRQARMNAN 137
           MQR +RRVSCT A+   ++ T+ R  +RQ ++N +
Sbjct: 471 MQRRLRRVSCTTAIPTPEEMTRLRSVNRQLQINVD 505


>UniRef50_Q8U4V0 Cluster: AGR_L_3054p; n=1; Agrobacterium
           tumefaciens str. C58|Rep: AGR_L_3054p - Agrobacterium
           tumefaciens (strain C58 / ATCC 33970)
          Length = 291

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 90  KTKQRIASRQARMNANVPRNIMTSLVLHAHRIERA 194
           + +Q I  R+ARMNA  PR     L+++A  I RA
Sbjct: 74  RRRQHIPDRKARMNARNPRQFRQDLLVNALEIPRA 108


>UniRef50_Q8N5C8 Cluster: Mitogen-activated protein kinase kinase
           kinase 7-interacting protein 3; n=29; Tetrapoda|Rep:
           Mitogen-activated protein kinase kinase kinase
           7-interacting protein 3 - Homo sapiens (Human)
          Length = 712

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +3

Query: 36  MQRTIRRVSCTDAVQQSKK-TKQRIASRQARMNAN 137
           MQR +RRVSCT A+   ++ T+ R  +RQ ++N +
Sbjct: 555 MQRRLRRVSCTTAIPTPEEMTRLRSMNRQLQINVD 589


>UniRef50_A0RRB7 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter fetus subsp. fetus 82-40|Rep: Putative
           uncharacterized protein - Campylobacter fetus subsp.
           fetus (strain 82-40)
          Length = 481

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -1

Query: 179 VCVKNKRRHNISRNISVHACLSGSYPLFCLLRLLDGICTRHPSNRPL 39
           VC   K  + I +    + CL   YP+F LL  L+   T+ P N+ L
Sbjct: 273 VCASTKSNYKILKTAFKNRCLKAGYPMFDLLPNLNS-KTQDPKNKIL 318


>UniRef50_A2WQS7 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 1125

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = -1

Query: 155 HNISRNISVHAC---LSGSYPLFCLLRLLDGICTRHPSN---RPLHTG 30
           HN+    S+H     L GS   FC L +LD +C +  SN    PLH G
Sbjct: 674 HNLVSLKSLHVYFEFLDGSLDQFCKLDMLDTLCLKRCSNLTYLPLHVG 721


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,838,463
Number of Sequences: 1657284
Number of extensions: 3347504
Number of successful extensions: 9212
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9210
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)