BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G19
(206 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein. 26 6.3
U71001-1|AAC47314.1| 1375|Drosophila melanogaster Frazzled protein. 26 6.3
AE013599-1516|AAM68622.1| 1375|Drosophila melanogaster CG8581-PB... 26 6.3
AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA... 26 6.3
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein. 26 8.3
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro... 26 8.3
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,... 26 8.3
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,... 26 8.3
>U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.
Length = 1526
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 59 HPSNRPLHTGIRYRLPS 9
HP +PL +G++ RLPS
Sbjct: 596 HPGGKPLDSGLQARLPS 612
>U71001-1|AAC47314.1| 1375|Drosophila melanogaster Frazzled protein.
Length = 1375
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 59 HPSNRPLHTGIRYRLPS 9
HP +PL +G++ RLPS
Sbjct: 445 HPGGKPLDSGLQARLPS 461
>AE013599-1516|AAM68622.1| 1375|Drosophila melanogaster CG8581-PB,
isoform B protein.
Length = 1375
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 59 HPSNRPLHTGIRYRLPS 9
HP +PL +G++ RLPS
Sbjct: 445 HPGGKPLDSGLQARLPS 461
>AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA,
isoform A protein.
Length = 1526
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 59 HPSNRPLHTGIRYRLPS 9
HP +PL +G++ RLPS
Sbjct: 596 HPGGKPLDSGLQARLPS 612
>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
Length = 1893
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 104 PLFCLLRLLDGICTRHPSNRPLHT 33
P CL+ LL+G+CT PLHT
Sbjct: 417 PRHCLISLLEGVCT----VTPLHT 436
>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p
protein.
Length = 2051
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 104 PLFCLLRLLDGICTRHPSNRPLHT 33
P CL+ LL+G+CT PLHT
Sbjct: 417 PRHCLISLLEGVCT----VTPLHT 436
>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
isoform A protein.
Length = 2051
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 104 PLFCLLRLLDGICTRHPSNRPLHT 33
P CL+ LL+G+CT PLHT
Sbjct: 417 PRHCLISLLEGVCT----VTPLHT 436
>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
isoform B protein.
Length = 1882
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 104 PLFCLLRLLDGICTRHPSNRPLHT 33
P CL+ LL+G+CT PLHT
Sbjct: 417 PRHCLISLLEGVCT----VTPLHT 436
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,678,716
Number of Sequences: 53049
Number of extensions: 171886
Number of successful extensions: 488
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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