Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G19
         (206 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   1.2  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   1.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   2.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   2.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   2.7  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         19   4.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   4.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          19   4.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    19   4.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    19   4.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   6.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   8.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   8.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   8.2  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 40  RGRFDGCRVQMPSSSRRRQNNG 105
           + RFDG    M S+S R + NG
Sbjct: 12  KDRFDGASRVMVSNSDRVRGNG 33


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 40  RGRFDGCRVQMPSSSRRRQNNG 105
           + RFDG    M S+S R + NG
Sbjct: 13  KDRFDGASRVMVSNSDRVRGNG 34


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 2.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 44  DDSTGVVYRCRPAVEEDKTTDSF 112
           D  T  + R  P    D+T+DSF
Sbjct: 149 DLKTDKILRIYPLKSSDQTSDSF 171


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 2.7
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 50  STGVVY--RCRPAVEEDKTTDS 109
           S+GVV    C PA + D+ TD+
Sbjct: 164 SSGVVSAGECGPAADVDEKTDA 185


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 2.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 86  RLLDGICTRHPSNRPL 39
           RLL GI ++HP    L
Sbjct: 189 RLLHGILSQHPQQHGL 204


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 72  HLYTTPVESSSAYW 31
           +LY +PV S+S Y+
Sbjct: 264 NLYYSPVASTSLYY 277


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -2

Query: 94  VFFDCWT 74
           VFF CWT
Sbjct: 268 VFFICWT 274


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 137 CSSKYYDVACSSRTPYR 187
           C S+Y D+    R  YR
Sbjct: 230 CHSRYEDLRHEDRNSYR 246


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 72  HLYTTPVESSSAYW 31
           +LY +PV S+S Y+
Sbjct: 264 NLYYSPVASTSLYY 277


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 72  HLYTTPVESSSAYW 31
           +LY +PV S+S Y+
Sbjct: 264 NLYYSPVASTSLYY 277


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 7/27 (25%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 78  GRHLYTTPVESSSAYWHSLSLALV-PK 1
           G H +++  E+++   HS++  ++ PK
Sbjct: 218 GEHDWSSKTETNATVLHSINKVIIHPK 244


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 83  VEEDKTTDSFQT 118
           VEE++T D F T
Sbjct: 171 VEENETYDEFDT 182


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 188 LYTVCVKNKRRHNISRN 138
           +YT   +NK+ H+  R+
Sbjct: 586 VYTCSARNKQGHSARRS 602


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 8.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 188 LYTVCVKNKRRHNISRN 138
           +YT   +NK+ H+  R+
Sbjct: 586 VYTCSARNKQGHSARRS 602


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,414
Number of Sequences: 438
Number of extensions: 1122
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2912559
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)