Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G14
(276 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 153 4e-39
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 149 1e-37
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 132 1e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 4e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 77 5e-16
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 47 4e-07
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 29 0.12
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.16
SPCC18.15 |||WD repeat protein, human WRDR85 family|Schizosaccha... 28 0.21
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 0.65
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 27 0.65
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 1.5
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 2.0
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 25 2.6
SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces pom... 24 3.5
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 23 6.1
SPAC11H11.02c |mug162||sequence orphan|Schizosaccharomyces pombe... 23 6.1
SPAC2F3.04c |rim1||mitochondrial single-stranded DNA binding pro... 23 6.1
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 23 8.0
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 23 8.0
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 23 8.0
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 23 8.0
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 23 8.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 153 bits (371), Expect = 4e-39
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
RTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+
Sbjct: 34 RTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVI 93
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
S G ++V YKG+ KTF PEE+SSMVL
Sbjct: 94 SKDGKPVLQVEYKGETKTFTPEEISSMVL 122
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 149 bits (360), Expect = 1e-37
Identities = 68/89 (76%), Positives = 77/89 (86%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
RTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+
Sbjct: 34 RTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVI 93
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
G I+V +KG+ KTF PEE+SSMVL
Sbjct: 94 EKDGKPLIQVEFKGETKTFTPEEISSMVL 122
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 132 bits (318), Expect = 1e-32
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+
Sbjct: 38 RTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVI 97
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
+ G+ I V Y G+ K F +E+S+MVL
Sbjct: 98 DNNGIPTIEVNYLGEKKQFTAQEISAMVL 126
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (264), Expect = 4e-26
Identities = 50/89 (56%), Positives = 64/89 (71%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
R TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V
Sbjct: 67 RITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIV 126
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
+D + V G K F PEE+S+M+L
Sbjct: 127 NDKNRPLVEVNVGGKKKKFTPEEISAMIL 155
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 77.0 bits (181), Expect = 5e-16
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 186
RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++
Sbjct: 82 RTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKI 141
Query: 187 VS-DGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
V G A + +G KT+ P ++ +L
Sbjct: 142 VEHSNGDAWLEA--RG--KTYSPSQIGGFIL 168
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 47.2 bits (107), Expect = 4e-07
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEV 186
R+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ + ++
Sbjct: 37 RSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKL 96
Query: 187 VSDGGMAKIRVAYKGDDKTF 246
G +V Y ++ F
Sbjct: 97 TEVDGFVGAKVQYLNEETAF 116
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.1 bits (62), Expect = 0.12
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +1
Query: 28 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGMA 207
+ F+D E GD A + P + AK L+G+ + + D P++V+ D +
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYD-RLG 183
Query: 208 KIRVAYKGDDKTFFPE 255
+++ G + F +
Sbjct: 184 PLKLMIDGTVRNFIAQ 199
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 28.7 bits (61), Expect = 0.16
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWPFEV 186
R S VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 55 RKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQ 114
Query: 187 VSDGGMAKIRVAYK-GDDKTFFPEEVSSMVL 276
+ + +++ D++ + EE+ +M +
Sbjct: 115 LVENEETTSGISFVISDEENYSLEEIIAMTM 145
>SPCC18.15 |||WD repeat protein, human WRDR85
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 28.3 bits (60), Expect = 0.21
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 213 DLCHTSITDNLERPVFHVGLYGGIFKFASDKTFGIKDGVIGV 88
D HT T N+ +P+F L GG+++ +T V+G+
Sbjct: 209 DFMHTLDTRNIGKPLFSANLGGGVWRLEHMETTENYHKVLGI 250
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 0.65
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -1
Query: 87 HRNLVLGCITDKTLSVGERN 28
H++++L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 26.6 bits (56), Expect = 0.65
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 159 GLYGGIFKFASDKTFGIKDGVIGVHRNLVLGCITDKTLSVGERNVRGRSSASC 1
G G + +A+ FGI D V N G +T+ TL E N + S A+C
Sbjct: 349 GYMGYVLSYAAKMLFGIDDVGPYVSMNNKNGDLTEYTLRHPETNEQLISMATC 401
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.4 bits (53), Expect = 1.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 236 SSPLYATLIFAIPPSLTTSKGQCFMSACTVASSNLRPIRRLASKMVLLG 90
SSP++AT F P S T +S + A+ P RR+ + LG
Sbjct: 72 SSPMHATKGFRFPKSSTPLTLPAVLSVASFANLLQIPTRRILRDLNRLG 120
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 2.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 167 FMSACTVASSNLRPIRRLASKMVLLGFIATWFLAASPIRRSVS 39
F + C N +P S+ V GFI W +AA PI S +
Sbjct: 1543 FFTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTA 1584
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 24.6 bits (51), Expect = 2.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -1
Query: 198 SITDNLERPVFHVGLYGGIFKFASDKTFGIKDGVIGVHRNLVLGCITDKTLSVGERNVRG 19
S DNL+ ++G++GG + + +G+ + G I TL + N+R
Sbjct: 16 SYVDNLDTKQLNIGVWGGHVSLHNLRIKPEALDKLGIPIEITSGLIGTFTLEIPWSNLRN 75
Query: 18 RS 13
+S
Sbjct: 76 KS 77
>SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 554
Score = 24.2 bits (50), Expect = 3.5
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -1
Query: 168 FHVGLYGGIFKFASDKTFGIKDGVIGVHRNLVLGCITDKTLSVGERNVR 22
F+ GL + +DK + + +G H++ +L C ++ S+ N R
Sbjct: 58 FYKGLDSYSKDWPADKVVEVVEKALGPHKSALLHCAIRQSRSLSVGNTR 106
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 23.4 bits (48), Expect = 6.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 204 HTSITDNLERPVFHVGLYGGIFKFASDKTFGI 109
+ S+TDN+ER +F +G GI S F +
Sbjct: 151 YPSVTDNIERFIF-MGGSTGIGNITSQAEFNV 181
>SPAC11H11.02c |mug162||sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 146 ASSNLRPIRRLASKMVLLGFIATWFL 69
A +NLR + ++LLG+I TW L
Sbjct: 12 ALNNLRIVIFFDILIILLGYIGTWNL 37
>SPAC2F3.04c |rim1||mitochondrial single-stranded DNA binding
protein Rim1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 23.4 bits (48), Expect = 6.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 106 FDAKRLIGRKFEDATVQADMKHWPFEVVSDGGMAKIRVAYKGDDKTFFP 252
FD + I RK V+AD ++G AK+ + + D F+P
Sbjct: 77 FDRLQTILRKGTRVYVEADAVWRSVPAGNEGSQAKMSLRHVSADVLFYP 125
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 23.0 bits (47), Expect = 8.0
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = -2
Query: 230 PLYATLIFAIPPS--LTTSKG 174
P Y TL+ +PPS LT S G
Sbjct: 285 PSYTTLVSQLPPSPCLTVSSG 305
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 23.0 bits (47), Expect = 8.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 210 LCHTSITDNLERPVFHVGLYGGIFKFASDKT 118
LC+ + + +L R + G+YG F F+S ++
Sbjct: 280 LCNATTSSSLFRQIASYGVYGS-FHFSSSES 309
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 23.0 bits (47), Expect = 8.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 63 ITDKTLSVGERNVRGRSSA 7
I++K S+ R+ RGRSSA
Sbjct: 211 ISEKDTSLSRRSSRGRSSA 229
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 23.0 bits (47), Expect = 8.0
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +1
Query: 79 VAMNPNNTIFDAKRLIGRKFE 141
++ N N+T+ DAK +G++ +
Sbjct: 14 LSFNENDTVLDAKEKLGQEID 34
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 23.0 bits (47), Expect = 8.0
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 85 MNPNNTIFDAKRLIGR 132
+NPNN I ++ R++G+
Sbjct: 135 INPNNVIHNSSRILGQ 150
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,170,887
Number of Sequences: 5004
Number of extensions: 21614
Number of successful extensions: 92
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 61717020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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