Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G14
(276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 152 4e-38
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 152 4e-38
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 129 2e-31
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 129 2e-31
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 126 2e-30
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 118 6e-28
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 118 6e-28
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 112 3e-26
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 74 2e-14
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 73 4e-14
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 62 4e-11
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 62 4e-11
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 62 7e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 59 4e-10
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 0.82
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 28 0.82
Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical pr... 26 3.3
AL032652-1|CAA21709.1| 317|Caenorhabditis elegans Hypothetical ... 26 3.3
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z49070-4|CAE45098.2| 528|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical pr... 26 4.4
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 26 4.4
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 26 4.4
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 26 4.4
U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein. 26 4.4
Z68302-8|CAA92632.2| 342|Caenorhabditis elegans Hypothetical pr... 25 5.8
L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical p... 25 5.8
U95181-1|AAD00776.1| 437|Caenorhabditis elegans 2,5 dihydroxyph... 25 7.7
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 25 7.7
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 25 7.7
AF100661-4|AAC68973.1| 481|Caenorhabditis elegans Hypothetical ... 25 7.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 152 bits (368), Expect = 4e-38
Identities = 69/90 (76%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
RTTPSYVAFTDTERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+
Sbjct: 36 RTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVI 95
Query: 190 S-DGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
S +G K++V YKG++K F PEE+SSMVL
Sbjct: 96 SAEGAKPKVQVEYKGENKIFTPEEISSMVL 125
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 152 bits (368), Expect = 4e-38
Identities = 69/90 (76%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
RTTPSYVAFTDTERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+
Sbjct: 36 RTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVI 95
Query: 190 S-DGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
S +G K++V YKG++K F PEE+SSMVL
Sbjct: 96 SAEGAKPKVQVEYKGENKIFTPEEISSMVL 125
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 129 bits (312), Expect = 2e-31
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
+TTPSYVAFTDTERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V
Sbjct: 36 KTTPSYVAFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVK 95
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
G I V KG+ + F PEE+S+MVL
Sbjct: 96 GKQGKPVIEVEVKGEKRQFNPEEISAMVL 124
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 129 bits (312), Expect = 2e-31
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
+TTPSYVAFTDTERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V
Sbjct: 36 KTTPSYVAFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVK 95
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
G I V KG+ + F PEE+S+MVL
Sbjct: 96 GKQGKPVIEVEVKGEKRQFNPEEISAMVL 124
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 126 bits (304), Expect = 2e-30
Identities = 56/89 (62%), Positives = 70/89 (78%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
+TTPSYVAFTDTERL+GDAAK+Q A NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V
Sbjct: 36 KTTPSYVAFTDTERLVGDAAKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVK 95
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
G + V KG+ + F EE+S+MVL
Sbjct: 96 GKQGKPVVEVEVKGEKREFNAEEISAMVL 124
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 118 bits (284), Expect = 6e-28
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFTDTE--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 183
R TPSYVAF+ + RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+
Sbjct: 65 RITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFK 124
Query: 184 VVSDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
V+ + V D+K F PEEVS+MVL
Sbjct: 125 VIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 118 bits (284), Expect = 6e-28
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFTDTE--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 183
R TPSYVAF+ + RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+
Sbjct: 65 RITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFK 124
Query: 184 VVSDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
V+ + V D+K F PEEVS+MVL
Sbjct: 125 VIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 112 bits (270), Expect = 3e-26
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFTDT--ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 183
R TPSYVAF+ ERLIGDAAKNQ+ +NP NTIFDAKRLIGR + + TVQ D+KHWPF+
Sbjct: 62 RITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFK 121
Query: 184 VVSDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
+V + V + K F PEEVS+MVL
Sbjct: 122 IVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 73.7 bits (173), Expect = 2e-14
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 186
RTTPS VAFT D ERL+G AK Q N NT+F KRLIGR++ED VQ D+K P+++
Sbjct: 63 RTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKI 122
Query: 187 V-SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
V + G A + + K + P +V + VL
Sbjct: 123 VKASNGDAWV----EAQGKVYSPSQVGAFVL 149
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 72.5 bits (170), Expect = 4e-14
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 186
RTTPS VAFT D ERL+G AK Q N NT+F KRLIGR++ED VQ D+K P+++
Sbjct: 63 RTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKI 122
Query: 187 V-SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
V + G A + + K + P +V + VL
Sbjct: 123 VKASNGDAWV----EAQGKEYPPSQVGAFVL 149
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.5 bits (145), Expect = 4e-11
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAF-TDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 186
RTTPS +A D + LIG AK+ + N++FD KR+IGR+++D +Q DM WPF+V
Sbjct: 32 RTTPSVLAVGEDGDLLIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKV 90
Query: 187 -VSDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
D G+ + + F VSS++L
Sbjct: 91 EKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.5 bits (145), Expect = 4e-11
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +1
Query: 10 RTTPSYVAF-TDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 186
RTTPS +A D + LIG AK+ + N++FD KR+IGR+++D +Q DM WPF+V
Sbjct: 32 RTTPSVLAVGEDGDLLIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKV 90
Query: 187 -VSDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
D G+ + + F VSS++L
Sbjct: 91 EKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 61.7 bits (143), Expect = 7e-11
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +1
Query: 10 RTTPSYVAFTDTER-LIGDAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPF 180
++ PS VAF LIG A Q NP TI+DAKR IGR FE + +D K +PF
Sbjct: 67 KSVPSVVAFLPNGTVLIGTRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPF 126
Query: 181 EVVSDG-GMAKIRVAYKGDDKTFFPEEVSSMVL 276
++ D G A + K +PEE+ S+++
Sbjct: 127 KINLDSEGKAFFEIPLDSGTKNVYPEEIGSLII 159
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 59.3 bits (137), Expect = 4e-10
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 16 TPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS- 192
TP+ V+F +R +G AA+ V N NT+ + K LIGRKF D Q + P +VV
Sbjct: 35 TPACVSFGPKDRSMGVAARQAVTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKL 94
Query: 193 DGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
++V+Y G+ TF PE+V + +L
Sbjct: 95 PNDDIGVQVSYLGEPHTFTPEQVLAALL 122
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 28.3 bits (60), Expect = 0.82
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 203 WQRSGWHTRVMTRPSSLRRSARWC 274
W G RV RP S+RR WC
Sbjct: 124 WTSPGVKVRVCIRPPSMRRRYSWC 147
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 28.3 bits (60), Expect = 0.82
Identities = 19/89 (21%), Positives = 36/89 (40%)
Frame = +1
Query: 10 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 189
R TP+ V D R DAA P+ L+G+ + + + + F V
Sbjct: 57 RKTPNVVMIQDGHRTFADAAIGMQVRYPHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEV 116
Query: 190 SDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
D + +K +++ E +++M+L
Sbjct: 117 DDAPKNASSINFKLGGESYTVEALTAMIL 145
>Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical
protein F22D6.9 protein.
Length = 368
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 133 KFEDATVQADMKHWPFEVVSDGGMAKIRVAYKG--DDKTFFPEEVSS 267
+FED + DM WPF M K + KG D K FP + S
Sbjct: 83 QFEDLKMMMDMNGWPFTEDEAKEMCK-NLLLKGGKDGKQTFPAVLGS 128
>AL032652-1|CAA21709.1| 317|Caenorhabditis elegans Hypothetical
protein Y63D3A.2 protein.
Length = 317
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 133 KFEDATVQADMKHWPFEVVSDGGMAKIRVAYKGDDKTF 246
+FE+ V +K P ++ G + K+RV ++G KTF
Sbjct: 249 QFEEQFVAQILKGIPHRAITPGELEKLRVQFRG--KTF 284
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 16 TPSYVAFTDTERLIGDAAKNQVAMNPNNTIF 108
T +V + E + KN M PN+T+F
Sbjct: 152 TTKFVDTKNVELYVNQLTKNMYTMKPNSTVF 182
>Z49070-4|CAE45098.2| 528|Caenorhabditis elegans Hypothetical
protein T09F3.5 protein.
Length = 528
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 188 SVMEVWQRSGWHTRVMTRPSSLRRSARW 271
+++EVW+R+GW ++ + +SA W
Sbjct: 464 ALLEVWRRTGWRN---SQHKRIAKSAEW 488
>Z29116-3|CAA82372.1| 485|Caenorhabditis elegans Hypothetical
protein ZK507.6 protein.
Length = 485
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 145 ATVQADMKHWPFEVVSDGGMA 207
A +QAD++ WP ++V D G++
Sbjct: 395 ANLQADVESWPQKMVDDTGIS 415
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 119 RLASKMVLLGFIATWFLA 66
R ++LLGFI TW LA
Sbjct: 197 RTTGVLILLGFIETWILA 214
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/55 (27%), Positives = 20/55 (36%)
Frame = -1
Query: 273 HHRADLLREEGLVITLVCHPDLCHTSITDNLERPVFHVGLYGGIFKFASDKTFGI 109
HH L + + + L DL + L P FHVG G D + I
Sbjct: 86 HHEGGELMDTSVTLLLEDVMDLLKNLHENGLSEPTFHVGGMGQALNRTEDGNYKI 140
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/55 (27%), Positives = 20/55 (36%)
Frame = -1
Query: 273 HHRADLLREEGLVITLVCHPDLCHTSITDNLERPVFHVGLYGGIFKFASDKTFGI 109
HH L + + + L DL + L P FHVG G D + I
Sbjct: 55 HHEGGELMDTSVTLLLEDVMDLLKNLHENGLSEPTFHVGGMGQALNRTEDGNYKI 109
>U20902-1|AAA84393.1| 485|Caenorhabditis elegans cyclin A protein.
Length = 485
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 145 ATVQADMKHWPFEVVSDGGMA 207
A +QAD++ WP ++V D G++
Sbjct: 395 ANLQADVESWPQKMVDDTGIS 415
>Z68302-8|CAA92632.2| 342|Caenorhabditis elegans Hypothetical
protein ZK792.7 protein.
Length = 342
Score = 25.4 bits (53), Expect = 5.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 118 VWHQRWCYWGSSQPGSWLHHR*DAQC 41
+W++ W YW S+ W H + +C
Sbjct: 24 LWNESWSYWWLSR--QWPEHEENGRC 47
>L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical
protein F10E9.10 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 169 VSCRLVRWHLQICVR*DVWHQRWCYWGSSQ 80
+SC L+ W+L C D ++ WGS++
Sbjct: 29 ISCSLLYWNLLYCKNYDCVVEKEFRWGSTR 58
>U95181-1|AAD00776.1| 437|Caenorhabditis elegans 2,5
dihydroxyphenylacetate oxidase protein.
Length = 437
Score = 25.0 bits (52), Expect = 7.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 109 DAKRLIGRKFEDATVQADMKHWPFEVVSDGGMAKIRVAYKGDDKTF 246
D + I K++ + QA H PFEVV G V YK D K F
Sbjct: 241 DGEFTIINKYQGSWFQAKQGHSPFEVV---GWHGNYVPYKYDLKKF 283
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 272 TIELTSSGKKVLSSPLYATLIFAIPPSLTTSKGQCF 165
T++L + KVLSS + F I +TS+ CF
Sbjct: 62 TVKLIDAQGKVLSSFSLVNIRFCIRGESSTSQNNCF 97
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 272 TIELTSSGKKVLSSPLYATLIFAIPPSLTTSKGQCF 165
T++L + KVLSS + F I +TS+ CF
Sbjct: 62 TVKLIDAQGKVLSSFSLVNIRFCIRGESSTSQNNCF 97
>AF100661-4|AAC68973.1| 481|Caenorhabditis elegans Hypothetical
protein H20E11.1a protein.
Length = 481
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 178 FEVVSDGGMAKIRVAYKGDDKTFFPEEVSSMVL 276
F +D G I AY GD+K F +V + +
Sbjct: 368 FNSEADNGYINITFAYTGDEKVQFAVDVDRVTM 400
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,626,782
Number of Sequences: 27780
Number of extensions: 127473
Number of successful extensions: 372
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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