Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G14
         (276 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   4.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    20   6.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   8.6  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    19   8.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    19   8.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    19   8.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    19   8.6  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 237 VITLVCHPDLCHTSITDNLERPVFHVGLYGGI 142
           ++T++ H D   T++ D L         +GGI
Sbjct: 147 IVTIMGHVDHGKTTLLDALRNTSIAKSEFGGI 178


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 131 ANLKMPPYKPT*NTGLS 181
           A LK+P YKP    G S
Sbjct: 880 AILKIPSYKPASTPGCS 896


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 206 AIPPSLTTSKGQCFMSACTV 147
           ++PP         FMS CTV
Sbjct: 297 SLPPVSYLKAVDAFMSVCTV 316


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 225 VCHPDLCHT 199
           +CHP + HT
Sbjct: 156 ICHPFISHT 164


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
          precursor protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 89 FIATWFLAAS 60
          FIA WF+A +
Sbjct: 8  FIAAWFIACT 17


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 124 IGRKFEDATVQA 159
           IGRKFE+A  +A
Sbjct: 212 IGRKFEEAFQKA 223


>AY939856-1|AAX33236.1|  223|Apis mellifera venom
          carbohydrate-rich protein precursor protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 89 FIATWFLAAS 60
          FIA WF+A +
Sbjct: 8  FIAAWFIACT 17


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2
          protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 89 FIATWFLAAS 60
          FIA WF+A +
Sbjct: 8  FIAAWFIACT 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,210
Number of Sequences: 438
Number of extensions: 1530
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)