Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G12
         (289 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   4.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   4.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   5.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   9.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 52  YKSPSAPVCVKARLV 96
           Y SP++ VC+ A L+
Sbjct: 621 YISPASQVCIAAALI 635


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 52  YKSPSAPVCVKARLV 96
           Y SP++ VC+ A L+
Sbjct: 711 YISPASQVCIAAALI 725


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 176 LFLAIVGTLFVTTPAIAIQC 235
           LFLA++     T+P I   C
Sbjct: 37  LFLALLNFFVATSPVIGEPC 56


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 284 DCALSPIRRIHLLGSRD 234
           D A+SP+RR    GSR+
Sbjct: 309 DGAVSPLRREKDRGSRE 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,347
Number of Sequences: 438
Number of extensions: 1530
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)