Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_G05
(272 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 134 7e-33
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 133 2e-32
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 33 0.024
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 33 0.024
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580... 28 0.89
04_03_0266 + 13648287-13649099,13649186-13649524 28 0.89
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 1.2
08_02_0630 - 19483485-19483671,19483761-19484179,19485180-194854... 28 1.2
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 28 1.2
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 1.5
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 27 1.5
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 27 1.5
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 27 1.5
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 1.5
12_01_0773 - 7039294-7039422,7039440-7039479,7039557-7039649,703... 27 2.0
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 27 2.0
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 27 2.0
02_05_0521 - 29726985-29727605 27 2.0
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 27 2.7
11_05_0007 - 18324969-18325063,18326580-18326745,18327078-183272... 26 3.6
02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212 26 3.6
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 26 4.7
07_01_0075 - 558829-560859 26 4.7
06_03_0569 + 22361917-22362291 26 4.7
06_01_0668 - 4882174-4884204 26 4.7
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 26 4.7
01_06_1453 - 37465665-37466627 26 4.7
12_02_0161 + 14659338-14659467,14659553-14659888,14660034-146602... 25 6.3
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 25 6.3
08_02_0563 - 18728901-18729014,18729094-18729324,18729358-187293... 25 6.3
03_04_0109 + 17354914-17355250,17355812-17355903 25 6.3
02_05_1089 + 34019162-34019164,34019249-34019465,34019558-340197... 25 6.3
01_01_0591 - 4401847-4402063,4402860-4403002,4403339-4403447,440... 25 6.3
11_01_0639 - 5128139-5128159,5128237-5128329,5128431-5128491,512... 25 8.3
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 25 8.3
08_02_1319 + 26117353-26117784 25 8.3
08_01_0804 - 7774631-7775152,7775985-7776083 25 8.3
07_01_0801 - 6278119-6278304,6278382-6278474,6278576-6278636,627... 25 8.3
06_01_1036 + 8134132-8134539,8134885-8134956,8134969-8135088,813... 25 8.3
04_04_0065 + 22456225-22456744,22456813-22457768 25 8.3
03_04_0217 - 18726511-18726624,18726704-18726947,18727067-187272... 25 8.3
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 25 8.3
02_05_1287 - 35459419-35459955,35460043-35460966,35461881-354622... 25 8.3
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 134 bits (325), Expect = 7e-33
Identities = 59/83 (71%), Positives = 72/83 (86%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
+R R+ EA++KGRH G+GKRRG
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRG 83
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 133 bits (322), Expect = 2e-32
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
+R R+ EA++KGRH G+GKRRG
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRG 83
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 33.5 bits (73), Expect = 0.024
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 38 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 208
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 209 VRKNTEARRKGRHCGFG 259
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 33.5 bits (73), Expect = 0.024
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 38 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 208
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 209 VRKNTEARRKGRHCGFG 259
+ T RKGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>11_05_0010 -
18356835-18357080,18357475-18357672,18357780-18358046,
18358870-18359067,18359151-18359417,18359524-18359724,
18359807-18361363,18361499-18361859,18362602-18363467
Length = 1386
Score = 28.3 bits (60), Expect = 0.89
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -2
Query: 265 PLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKP 89
P KA ++S LC + S+W ++ I+D + DVL I ID +W KP
Sbjct: 248 PNVKAVLSSI---LCQVSQLKYENFSSW--GEKEIIDKIRDVLKDIRYFIIIDDIWDKP 301
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 0.89
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 77 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 223
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 92 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 196
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>08_02_0630 -
19483485-19483671,19483761-19484179,19485180-19485413,
19485714-19485851
Length = 325
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 198 PALVFAKTQRRAGKDVTVALVRGEV 272
P LVF KT G V VAL+ G+V
Sbjct: 70 PVLVFPKTSTDGGSSVIVALLPGDV 94
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 203 ARVRKNTEARRK 238
NT RK
Sbjct: 162 IENSPNTVTVRK 173
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 47 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 172
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 89 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 262
++D N+ + + +SR ++ ++ GL +K PV + VR E GR G G+
Sbjct: 29 YVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVR---ELYTLGRELGQGQ 83
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -2
Query: 262 LTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIK 92
+ +A+ L + S G+ F + I DHL + +G + I +VWI+
Sbjct: 1264 IIRASTVHDEKTLLRYVRQSPGVTEPCFSRGRVITDHLLKISNGAQRWELISMVWIE 1320
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 5 EAHRARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 181
+ +R R L K V R LDP +NE N R N+ IKD L ++
Sbjct: 528 DLYRVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 1.5
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 77 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK 238
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>12_01_0773 -
7039294-7039422,7039440-7039479,7039557-7039649,
7039900-7040010,7040091-7040342,7040407-7040903,
7040923-7041777,7041883-7042143,7042183-7042551,
7042637-7042876
Length = 948
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -2
Query: 133 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 41
GIS+ D +DLV W K +FF N G KP+L
Sbjct: 462 GISVLGDAVDLVILWHKNDIFFGLGTNAGEKPVL 495
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -2
Query: 163 ILDHLTDVLSGISISDFIDLVWIKPHLFFTASH 65
+L H L + S + L W+KP F+ SH
Sbjct: 490 LLKHAKGSLISVGWSVILPLSWVKPFWFYLVSH 522
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 27.1 bits (57), Expect = 2.0
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -2
Query: 160 LDHLTDVLSGISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 41
+D+LT GIS+ D +DLV W K +FF + G KP+L
Sbjct: 456 IDYLT--ADGISVLGDAVDLVILWHKNDIFFGLGTDAGEKPVL 496
>02_05_0521 - 29726985-29727605
Length = 206
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 134 RQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRR 268
R +R M++ GL + +AV A R + EARR+ R +RR
Sbjct: 54 RAAVRGMVRGGLAPRARLAVLRAAAFRDSREARRRIRRDRRRRRR 98
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 164 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRR 268
G+ +K+ H + + R+GRH G+G+RR
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRR 246
>11_05_0007 -
18324969-18325063,18326580-18326745,18327078-18327275,
18327377-18327643,18328070-18328129,18328767-18329033,
18329156-18329359,18329441-18331496,18332517-18333358
Length = 1384
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 226 LCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKP 89
LC + S+W ++ I+D + D+L I ID +W KP
Sbjct: 250 LCQVSQLKYENFSSW--GEKEIIDKIRDILKDIRYFIIIDDIWDKP 293
>02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212
Length = 297
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 143 IRKMIKDGLVIKKPVAVHSRA 205
+RK I +GLV+ P AVH R+
Sbjct: 277 LRKQITEGLVMASPHAVHFRS 297
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 92 LDPNEINEIANTNSRQNIRKMIKDGLVIKK 181
LDP +NE N R NI IKD L ++
Sbjct: 685 LDPAVVNETTLKNDRANIVAYIKDCLFARQ 714
>07_01_0075 - 558829-560859
Length = 676
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 205 SAGMDSNWFL-DDQTILDHLTDVLSGISISDFID 107
SA + ++ L DD+ D L ++L G +++DF+D
Sbjct: 429 SASLKKHYLLADDEWKEDILPEILDGHNVADFLD 462
>06_03_0569 + 22361917-22362291
Length = 124
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 183 QLLSIPALVFAKTQRRAG 236
QLL PALV + QRRAG
Sbjct: 17 QLLQQPALVVVRPQRRAG 34
>06_01_0668 - 4882174-4884204
Length = 676
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 205 SAGMDSNWFL-DDQTILDHLTDVLSGISISDFID 107
SA + ++ L DD+ D L ++L G +++DF+D
Sbjct: 429 SASLKKHYLLADDEWKEDILPEILDGHNVADFLD 462
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 158 KDGLVIKKPVAVHSRARVRKNTEARRKGRHC---GFGKRR 268
KDG ++ + +RA R +T+A R+ HC G+G RR
Sbjct: 174 KDGRNLQAGAQLCARAASRGHTDALRELGHCVSDGYGVRR 213
>01_06_1453 - 37465665-37466627
Length = 320
Score = 25.8 bits (54), Expect = 4.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -2
Query: 259 TKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHL---TDVLSGISISDFIDLV 101
T T+ + LC A+ A + F DQ+ D L TDV S+S + +V
Sbjct: 216 TSTATTATTSMLCTDASVQAALGELNFAMDQSCFDSLGLPTDVAGAGSLSSWCSIV 271
>12_02_0161 +
14659338-14659467,14659553-14659888,14660034-14660266,
14660344-14660805,14660887-14661719,14661802-14661972,
14662052-14662352
Length = 821
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 68 RCGKKKVWLDPNEINEIANTNSRQNIRKMI 157
R GK+ +LDP+ +NE+ N RQ+ K++
Sbjct: 673 RLGKQVGFLDPSMVNEV---NLRQSFTKVV 699
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -2
Query: 133 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 41
GIS+ D IDLV W K +FF + G KP+L
Sbjct: 508 GISVLGDAIDLVILWHKNDIFFGLGTDAGEKPVL 541
>08_02_0563 -
18728901-18729014,18729094-18729324,18729358-18729376,
18729457-18729627,18731145-18731377
Length = 255
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 92 LDPNEINEIANTNSRQNIRKMIKDGL 169
LDP INE N R NI IKD L
Sbjct: 94 LDPAVINETTLKNDRANIVGYIKDCL 119
>03_04_0109 + 17354914-17355250,17355812-17355903
Length = 142
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 146 RKMIKDGLVIKKPVAVHSRAR 208
R M+ DG+++++ VAV SR R
Sbjct: 114 RCMVFDGMMVRRRVAVRSRGR 134
>02_05_1089 +
34019162-34019164,34019249-34019465,34019558-34019714,
34019935-34020071,34020387-34020490,34020593-34020688,
34020818-34020908,34021384-34021504,34021579-34021775,
34022605-34022705,34022778-34022833,34023689-34023778,
34023865-34023964,34024194-34024295,34024372-34024441,
34024696-34024850,34024944-34025068,34025126-34025144
Length = 646
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 177 LMTRPSLIILRMFCLELVLAISLISFGSSHTFFLP 73
++++ S + + C EL+ I++ S G +HTF P
Sbjct: 122 IVSKSSDLAITEECFELLSLIAIASDGGAHTFCEP 156
>01_01_0591 -
4401847-4402063,4402860-4403002,4403339-4403447,
4403546-4404707,4405754-4405865,4405980-4406015
Length = 592
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 247 VTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLFFTAS 68
V + P RL + +A D+ +DD +L +S SD + L W + L A
Sbjct: 217 VAATPRRLTRLNHFTAAADAAAAMDDSGDEHQQRTLLKTLSRSDRVGLAWPEQPLDLLAK 276
Query: 67 H 65
H
Sbjct: 277 H 277
>11_01_0639 -
5128139-5128159,5128237-5128329,5128431-5128491,
5128579-5128689,5128770-5129021,5129105-5129440,
5129486-5131140,5131316-5131555
Length = 922
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -2
Query: 133 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 41
GIS+ D +DLV W K +FF + G KP+L
Sbjct: 480 GISVLGDAVDLVILWHKNDIFFGLGTDAGEKPVL 513
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 135 LELVLAISLISFGSSHTFFLPHRITEAASLFCNFREL 25
L+ L +S SS +++LP RI E + REL
Sbjct: 84 LDFALFADTLSSSSSSSWWLPWRIAERHRVAARIREL 120
>08_02_1319 + 26117353-26117784
Length = 143
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -2
Query: 133 GISISDFIDLVWIKPHLFF 77
G++ SD I+++WI+ L+F
Sbjct: 54 GVTASDCIEMMWIQSMLYF 72
>08_01_0804 - 7774631-7775152,7775985-7776083
Length = 206
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 178 ETSCCPFPRSCSQKHRGAQE 237
ET C P SCS KH GA+E
Sbjct: 99 ETPCSP---SCSGKHGGAEE 115
>07_01_0801 -
6278119-6278304,6278382-6278474,6278576-6278636,
6278724-6278834,6278915-6279166,6279250-6280367
Length = 606
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -2
Query: 133 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 41
GIS+ D +DLV W K +FF + G KP+L
Sbjct: 85 GISVLGDAVDLVILWHKNDIFFGLGTDAGEKPVL 118
>06_01_1036 +
8134132-8134539,8134885-8134956,8134969-8135088,
8135179-8135256,8135442-8135697,8136427-8136515,
8137229-8137376,8137460-8137899,8138048-8138562,
8138791-8139061,8139231-8139492,8139583-8139938
Length = 1004
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -2
Query: 214 ANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLFFTASHNRGCKPLL 41
A T+ G ++ + + + + L D + +ISD++DLV K HL +++ + LL
Sbjct: 347 AATTTGTEAAVYASEASDKNDLLDSVLPSTISDYVDLV--KAHLSAGPNYHFASRQLL 402
>04_04_0065 + 22456225-22456744,22456813-22457768
Length = 491
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 216 LRTRAREWTATGFLMTRP 163
+R RA EW TG TRP
Sbjct: 451 MRRRAGEWKETGLRATRP 468
>03_04_0217 -
18726511-18726624,18726704-18726947,18727067-18727237,
18727315-18727520
Length = 244
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 92 LDPNEINEIANTNSRQNIRKMIKDGLVIKK 181
LDP +NE N R N+ IKD L ++
Sbjct: 85 LDPAVVNETTLKNDRANMMGYIKDCLFARQ 114
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 163 WSGHQETSCCPFPRSCSQKHR 225
W G + S C R CS+KH+
Sbjct: 198 WKGDKLCSSCKKARYCSEKHQ 218
>02_05_1287 -
35459419-35459955,35460043-35460966,35461881-35462268,
35463645-35463748,35464740-35464928,35465231-35465362
Length = 757
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 122 NTNSRQNIRKMIKDGLVIKKPVAVHSRA 205
N ++ +RK I +GLV+ P +H R+
Sbjct: 730 NIVEQELLRKQITEGLVMASPHVIHFRS 757
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,989,251
Number of Sequences: 37544
Number of extensions: 141847
Number of successful extensions: 450
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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