Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G05
         (272 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537435-1|CAD97677.1|  205|Homo sapiens hypothetical protein pr...   148   4e-36
X63527-1|CAA45090.1|  196|Homo sapiens ribosomal protein L19 pro...   146   1e-35
S56985-1|AAB25672.1|  196|Homo sapiens ribosomal protein L19 pro...   146   1e-35
BC095445-1|AAH95445.1|  196|Homo sapiens ribosomal protein L19 p...   146   1e-35
BC066315-1|AAH66315.1|  196|Homo sapiens ribosomal protein L19 p...   146   1e-35
BC062709-1|AAH62709.1|  196|Homo sapiens ribosomal protein L19 p...   146   1e-35
BC013016-1|AAH13016.1|  196|Homo sapiens ribosomal protein L19 p...   146   1e-35
BC000530-1|AAH00530.1|  196|Homo sapiens ribosomal protein L19 p...   146   1e-35
AK223082-1|BAD96802.1|  196|Homo sapiens ribosomal protein L19 v...   146   1e-35
AY157980-1|AAN76335.1|  173|Homo sapiens ribosomal protein L19 p...   115   2e-26
AK127658-1|BAC87076.1|  626|Homo sapiens protein ( Homo sapiens ...    31   0.50 
AB082533-1|BAC02711.1|  764|Homo sapiens KIAA2002 protein protein.     31   0.50 
L43615-1|AAB59491.1|  237|Homo sapiens coagulation factor XII pr...    28   6.1  

>BX537435-1|CAD97677.1|  205|Homo sapiens hypothetical protein
           protein.
          Length = 205

 Score =  148 bits (358), Expect = 4e-36
 Identities = 69/88 (78%), Positives = 76/88 (86%)
 Frame = +2

Query: 8   AHRARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 187
           A  A MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV
Sbjct: 5   AAAAAMSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPV 64

Query: 188 AVHSRARVRKNTEARRKGRHCGFGKRRG 271
            VHSRAR RKNT ARRKGRH G GKR+G
Sbjct: 65  TVHSRARCRKNTLARRKGRHMGIGKRKG 92


>X63527-1|CAA45090.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>S56985-1|AAB25672.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>BC095445-1|AAH95445.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>BC066315-1|AAH66315.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>BC062709-1|AAH62709.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>BC013016-1|AAH13016.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>BC000530-1|AAH00530.1|  196|Homo sapiens ribosomal protein L19
           protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>AK223082-1|BAD96802.1|  196|Homo sapiens ribosomal protein L19
           variant protein.
          Length = 196

 Score =  146 bits (354), Expect = 1e-35
 Identities = 67/83 (80%), Positives = 74/83 (89%)
 Frame = +2

Query: 23  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
           MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 203 ARVRKNTEARRKGRHCGFGKRRG 271
           AR RKNT ARRKGRH G GKR+G
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKG 83


>AY157980-1|AAN76335.1|  173|Homo sapiens ribosomal protein L19
           protein.
          Length = 173

 Score =  115 bits (277), Expect = 2e-26
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = +2

Query: 80  KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 259
           KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1   KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60

Query: 260 KRRG 271
           KR+G
Sbjct: 61  KRKG 64


>AK127658-1|BAC87076.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45756 fis, clone MESAN2009156. ).
          Length = 626

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 271 TSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 104
           T P++K    S  + LCV AN +  +D NW  D  +    ++  L G+ I  +  L
Sbjct: 413 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 466


>AB082533-1|BAC02711.1|  764|Homo sapiens KIAA2002 protein protein.
          Length = 764

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 271 TSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 104
           T P++K    S  + LCV AN +  +D NW  D  +    ++  L G+ I  +  L
Sbjct: 183 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 236


>L43615-1|AAB59491.1|  237|Homo sapiens coagulation factor XII
           protein.
          Length = 237

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 163 WSGHQETSCCPFPRSCSQKHRGAQE 237
           W GH    C PFP+    + R AQE
Sbjct: 212 WLGHGRQDCVPFPQCGQLRARMAQE 236


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,773,797
Number of Sequences: 237096
Number of extensions: 756335
Number of successful extensions: 1599
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)