Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G05
         (272 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   2.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   2.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   4.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   6.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   6.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   6.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   6.4  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              19   8.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    19   8.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   8.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   8.4  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 19  QDEFPKVTEEACSLC 63
           +DEF +  +  CSLC
Sbjct: 263 EDEFDEFGDSKCSLC 277


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 141 FCLELVLAISLISFGSSHTFFLPHRITEAASL 46
           + + L+L   LISF     F+LP    E  +L
Sbjct: 236 YTVNLILPTVLISFLCVLVFYLPAEAGEKVTL 267


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 198 EWTATGFLMTRPSLIILRMFCLELVLAISL 109
           +W     ++ R  LII  +F +   +A+ L
Sbjct: 518 DWKFAAMVIDRMCLIIFTLFTIIATIAVLL 547


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 155 IKDGLVIKKPVAVH 196
           +KDG+V+   + VH
Sbjct: 286 VKDGIVLATGITVH 299


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 166 SGHQETSCCPFPRSCSQKHRG 228
           +G   +  CP PRS   K  G
Sbjct: 374 NGQTHSQLCPTPRSTHLKVSG 394


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 155 IKDGLVIKKPVAVH 196
           +KDG+V+   + VH
Sbjct: 286 VKDGIVLATGITVH 299


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -2

Query: 220 VFANTSAGMDSNWFLDDQTI 161
           V+     GM+  WF   +T+
Sbjct: 383 VYNGDEIGMEDRWFTYQETV 402


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +2

Query: 83  KVWLDPNEINEI 118
           +++LD NE+N++
Sbjct: 89  EIYLDENEVNKL 100


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 141 FCLELVLAISLISFGSSHTFFLPHRITEAASL 46
           + + L++    ISF S   F+LP    E  SL
Sbjct: 239 YTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 270


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 160 GWSGHQETSCC 192
           G + HQ T CC
Sbjct: 820 GKTRHQNTGCC 830


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 198 EWTATGFLMTRPSL 157
           +W+  GFL TR S+
Sbjct: 156 KWSRKGFLRTRWSI 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,190
Number of Sequences: 438
Number of extensions: 1193
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)