Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_G02
         (306 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   0.85 
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   2.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    22   4.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   6.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    21   7.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -1

Query: 150 GSWPGRPTTMLWLPHDIFYHRKLRLILELYMWVRTHVHRRVIRPHY 13
           GS PG P   L+ P  + YH     +   Y  +R   H     P Y
Sbjct: 371 GSIPGMPPANLFNPAALAYHDPAIYLDPRYQMLRASHHSAAGHPLY 416



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 113 NHSIVVGR-PGQLPLPGSKTCRQVPIGV 193
           NH +  G  PG +P P  +  +Q P+G+
Sbjct: 111 NHHLPPGASPGLVPPPQQQQQQQAPLGI 138


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 96  YHRKLRLILELYMWVRTHVHRRVIRPHYQPS 4
           ++R +R + ELY  +   +   VIR    PS
Sbjct: 263 FYRLMRALDELYHLIAARIDEAVIRMEKNPS 293


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 159  PGSGSWPG 136
            PG GSWPG
Sbjct: 1220 PGRGSWPG 1227


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 179 VPIGVFL*HNFRTSTSRLSEFTILDHIIIKQQPR 280
           +P+G +  H+F +  SR +E    D  +++   R
Sbjct: 758 IPVGHYAQHHFNSQGSRKAEPYYCDRTLVQSLVR 791


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 244  HPGPHHH 264
            HP PHHH
Sbjct: 1400 HPHPHHH 1406


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 125 VVGRPGQLPLPGSKTCRQVP 184
           ++GRPG   LPG +  R +P
Sbjct: 604 LMGRPGNDGLPGPQGQRGLP 623


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,222
Number of Sequences: 2352
Number of extensions: 7334
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)