Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F24
         (216 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   0.64 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   1.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   1.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   1.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   1.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   3.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    19   4.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   4.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   5.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   5.9  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 0.64
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 185 GYRN*PDKSLHQLRTAMHHHPPNQERAVNLSIL 87
           GY + P +S H+L T +  +PPN   AV  S L
Sbjct: 40  GYHS-PLESNHKLVTFILKNPPNLNPAVQGSSL 71


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 125 PPNQERAVNLSILPVSGP 72
           PPN   AV   +LPV  P
Sbjct: 351 PPNPLDAVTSGLLPVRPP 368


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = -3

Query: 115 KKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPF 11
           K  L +   ++  G+++FP+ +     +  L +PF
Sbjct: 50  KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPF 84


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = -3

Query: 115 KKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPF 11
           K  L +   ++  G+++FP+ +     +  L +PF
Sbjct: 6   KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPF 40


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 179 RN*PDKSLHQLRTAMHHH 126
           RN PD S H LR+    H
Sbjct: 55  RNVPDNSFHFLRSLKKVH 72


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 127 WWCMAVLSWWSDLSG 171
           WW +     W D+SG
Sbjct: 189 WWDVHSTGSWLDMSG 203


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = -1

Query: 207 FSRKESRGLPELTRQIAPPTKNGHAPPPT 121
           F R+  +     +  + PP    ++PPP+
Sbjct: 4   FVRQVKQEADSTSPLLTPPHNPAYSPPPS 32


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 164 CLVNSGNPRDSFLLNRR 214
           C+   GN R   ++NR+
Sbjct: 88  CIPGDGNKRSIIVVNRK 104


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
          protein.
          Length = 980

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 69 TRPGHRK 89
          +RPGHRK
Sbjct: 65 SRPGHRK 71


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 7   GGRAPPGVE 33
           G +APPGVE
Sbjct: 291 GLKAPPGVE 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,985
Number of Sequences: 336
Number of extensions: 1218
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2794090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)