Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F24
         (216 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013764-1|AAH13764.1|  325|Homo sapiens potassium channel tetra...    28   4.7  
AF359381-1|AAQ15187.1|  325|Homo sapiens C13orf2 protein.              28   4.7  
BC011889-1|AAH11889.1|  424|Homo sapiens protein kinase C and ca...    28   6.2  
BC007914-1|AAH07914.1|  424|Homo sapiens protein kinase C and ca...    28   6.2  
AK000577-1|BAA91267.1|  405|Homo sapiens protein ( Homo sapiens ...    28   6.2  
AF242530-1|AAK29207.1|  424|Homo sapiens protein kinase C and ca...    28   6.2  
AF149825-1|AAG31023.1|  424|Homo sapiens PACSIN3 protein.              28   6.2  
AF130979-1|AAF04472.1|  424|Homo sapiens SH3 domain-containing p...    28   6.2  
AF200715-1|AAF08006.1|  304|Homo sapiens PTB domain adaptor prot...    27   8.3  
AF191771-1|AAF18975.1|  304|Homo sapiens CED-6 protein protein.        27   8.3  
AC092598-1|AAX93242.1|  171|Homo sapiens unknown protein.              27   8.3  
AB209890-1|BAD93127.1|  146|Homo sapiens GULP, engulfment adapto...    27   8.3  

>BC013764-1|AAH13764.1|  325|Homo sapiens potassium channel
           tetramerisation domain containing 12 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 213 RLFSRKESRGLPELTRQIAPPTKNGHAPPPT 121
           RL    E   LPEL R++  P + G  PPP+
Sbjct: 112 RLQREAEYFELPELVRRLGAPQQPGPGPPPS 142


>AF359381-1|AAQ15187.1|  325|Homo sapiens C13orf2 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 213 RLFSRKESRGLPELTRQIAPPTKNGHAPPPT 121
           RL    E   LPEL R++  P + G  PPP+
Sbjct: 112 RLQREAEYFELPELVRRLGAPQQPGPGPPPS 142


>BC011889-1|AAH11889.1|  424|Homo sapiens protein kinase C and
           casein kinase substrate in neurons 3 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 216 RRLFSRKESRGLP--ELTRQIAPPTKNGHAPPP 124
           +R  SRKE  G    E+T     PT++G APPP
Sbjct: 307 QRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPP 339


>BC007914-1|AAH07914.1|  424|Homo sapiens protein kinase C and
           casein kinase substrate in neurons 3 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 216 RRLFSRKESRGLP--ELTRQIAPPTKNGHAPPP 124
           +R  SRKE  G    E+T     PT++G APPP
Sbjct: 307 QRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPP 339


>AK000577-1|BAA91267.1|  405|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20570 fis, clone REC00956. ).
          Length = 405

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 216 RRLFSRKESRGLP--ELTRQIAPPTKNGHAPPP 124
           +R  SRKE  G    E+T     PT++G APPP
Sbjct: 307 QRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPP 339


>AF242530-1|AAK29207.1|  424|Homo sapiens protein kinase C and
           casein kinase substrate 3 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 216 RRLFSRKESRGLP--ELTRQIAPPTKNGHAPPP 124
           +R  SRKE  G    E+T     PT++G APPP
Sbjct: 307 QRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPP 339


>AF149825-1|AAG31023.1|  424|Homo sapiens PACSIN3 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 216 RRLFSRKESRGLP--ELTRQIAPPTKNGHAPPP 124
           +R  SRKE  G    E+T     PT++G APPP
Sbjct: 307 QRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPP 339


>AF130979-1|AAF04472.1|  424|Homo sapiens SH3 domain-containing
           protein 6511 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 216 RRLFSRKESRGLP--ELTRQIAPPTKNGHAPPP 124
           +R  SRKE  G    E+T     PT++G APPP
Sbjct: 307 QRTISRKEKGGRSPDEVTLTSIVPTRDGTAPPP 339


>AF200715-1|AAF08006.1|  304|Homo sapiens PTB domain adaptor protein
           CED-6 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 174 LTRQIAPPTKNGHAPPPTESRKS 106
           ++ Q + PT+NG  PPP  SR +
Sbjct: 225 ISHQSSMPTRNGTQPPPVPSRST 247


>AF191771-1|AAF18975.1|  304|Homo sapiens CED-6 protein protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 174 LTRQIAPPTKNGHAPPPTESRKS 106
           ++ Q + PT+NG  PPP  SR +
Sbjct: 225 ISHQSSMPTRNGTQPPPVPSRST 247


>AC092598-1|AAX93242.1|  171|Homo sapiens unknown protein.
          Length = 171

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 174 LTRQIAPPTKNGHAPPPTESRKS 106
           ++ Q + PT+NG  PPP  SR +
Sbjct: 92  ISHQSSMPTRNGTQPPPVPSRST 114


>AB209890-1|BAD93127.1|  146|Homo sapiens GULP, engulfment adaptor
           PTB domain containing 1 variant protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 174 LTRQIAPPTKNGHAPPPTESRKS 106
           ++ Q + PT+NG  PPP  SR +
Sbjct: 49  ISHQSSMPTRNGTQPPPVPSRST 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,176,394
Number of Sequences: 237096
Number of extensions: 923219
Number of successful extensions: 2636
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2636
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)