Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F24
         (216 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p pro...    31   0.29 
AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   0.29 
AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-P...    30   0.38 
AE014298-1144|AAF46343.1|  600|Drosophila melanogaster CG2278-PA...    27   2.7  
BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p pro...    26   6.2  
AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.     26   6.2  
AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protei...    26   6.2  
AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB...    26   6.2  
AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA...    26   6.2  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    26   6.2  

>AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p
           protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 1   ARGGRAPPGVEPAA*FDSTREISPGPDTGRIDRLTALS 114
           + G  APP   P A   S+++I   P  G +D LTA S
Sbjct: 535 SEGSVAPPETAPLAVSASSKDIKGAPSIGALDTLTATS 572


>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 167 DKSLHQLRTAMHHHPPNQE 111
           ++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-PA
           protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 0.38
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 1   ARGGRAPPGVEPAA*FDSTREISPGPDTGRIDRLTALS 114
           + G  APP   P A   S+++I   P  G +D LTA S
Sbjct: 535 SEGSVAPPETVPLAVSASSKDIKGAPSIGALDTLTATS 572


>AE014298-1144|AAF46343.1|  600|Drosophila melanogaster CG2278-PA
           protein.
          Length = 600

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 134 HHHPPNQERAVNLSILPVSGPGEISRVESN*AAGSTPGGALPPR 3
           HHH P+Q + V  +++    P +   V S   AG+ P    P R
Sbjct: 188 HHHHPHQPQPVPSAVVTTVAPSQPPAVVSALYAGTQPPTPSPRR 231


>BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p
           protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 155 HQLRTAMHHHPPNQERAVNLSILPVS 78
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 155 HQLRTAMHHHPPNQERAVNLSILPVS 78
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protein
           protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 155 HQLRTAMHHHPPNQERAVNLSILPVS 78
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB,
           isoform B protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 155 HQLRTAMHHHPPNQERAVNLSILPVS 78
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA,
           isoform A protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 155 HQLRTAMHHHPPNQERAVNLSILPVS 78
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 192 SRGLPELTRQIAPPTKNGHAPPPT 121
           ++ LP +T ++ PP  +   PPPT
Sbjct: 260 NKPLPPVTTRLPPPPPSPRTPPPT 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,461,102
Number of Sequences: 53049
Number of extensions: 270885
Number of successful extensions: 1006
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 24,988,368
effective HSP length: 51
effective length of database: 22,282,869
effective search space used: 445657380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)