Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F24
         (216 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   1.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   1.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    19   5.1  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    19   5.1  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    19   5.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   6.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   6.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   6.7  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 174 LTRQIAPPTKNGHAPPPTESRKS 106
           + RQ+    + GH  PP +  +S
Sbjct: 263 VNRQLNSDVQPGHGSPPVKQHRS 285


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect(2) = 1.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 40  PQAPLLVVPF 11
           P +PLLV PF
Sbjct: 450 PHSPLLVAPF 459



 Score = 18.6 bits (36), Expect(2) = 1.8
 Identities = 4/10 (40%), Positives = 8/10 (80%)
 Frame = -3

Query: 190 SWVTGINQTN 161
           +W+ G+N+ N
Sbjct: 423 TWIAGLNEEN 432


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 180 PELTRQIAPPTKNGHA 133
           P+L  ++ PP K+G A
Sbjct: 45  PKLYDKMRPPKKDGQA 60


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 149 LRTAMHHHPPNQERAVNL 96
           L  AMH +PP    A++L
Sbjct: 132 LHLAMHDYPPLVSGALHL 149


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 149 LRTAMHHHPPNQERAVNL 96
           L  AMH +PP    A++L
Sbjct: 100 LHLAMHDYPPLVSGALHL 117


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 47  LTQHGKSHQARTPEGL 94
           + ++GK     TPEGL
Sbjct: 346 IDEYGKKIDIYTPEGL 361


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 47  LTQHGKSHQARTPEGL 94
           + ++GK     TPEGL
Sbjct: 346 IDEYGKKIDIYTPEGL 361


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 140 AMHHHPPNQE 111
           AMHH+P  ++
Sbjct: 794 AMHHYPTRED 803


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,081
Number of Sequences: 438
Number of extensions: 1381
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)