Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F22
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   3.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   3.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   3.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   8.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   8.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   8.0  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 216  YPHQRTFPCLAKG*VPVVCTEEV 148
            Y    T PCLA G  P V T ++
Sbjct: 1320 YKEDVTLPCLAVGLPPPVITWKI 1342


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = -3

Query: 114 HATLHVLVCSMLPQLQFSYGRKLVRLGLVHVL 19
           H  LH  +C+++ +    +G +++ +  V V+
Sbjct: 212 HQNLHNKICNLIDEFNECFGLQILGILFVGVI 243


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 263 CINLCNMSTTFSSHSNIH 210
           C+N   +++   SHSN++
Sbjct: 268 CVNKSMLNSHMKSHSNVY 285


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 263 CINLCNMSTTFSSHSNIH 210
           C+N   +++   SHSN++
Sbjct: 26  CVNKSMLNSHMKSHSNVY 43


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
 Frame = +2

Query: 164 TTGTY-PFARQGKVLW----CGY*SDWKRWW 241
           TTG   PF +   VL     C + SDW R W
Sbjct: 268 TTGIAGPFTQSPGVLGFNEICSFYSDWTRVW 298


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 125 PPRPGRTQTSSVQTTGTYP 181
           PP P RTQ + V T  T P
Sbjct: 486 PPYPNRTQITEV-TQQTEP 503


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +2

Query: 212 GY*SDWKRWWTCCTGLCNQ 268
           G+ +   R+WTC  G   +
Sbjct: 107 GHETSCTRYWTCWNGTATE 125


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory
          receptor candidate 60 protein.
          Length = 364

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 38 LDWFTSCLL 12
          +DW+T CL+
Sbjct: 17 IDWYTVCLV 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,490
Number of Sequences: 336
Number of extensions: 2003
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)