Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F22
(338 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 180 1e-45
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 180 1e-45
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 180 1e-45
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 180 1e-45
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 1e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 109 2e-24
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 41 0.001
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 41 0.001
AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein. 33 0.30
BX537652-1|CAD97804.1| 793|Homo sapiens hypothetical protein pr... 29 4.8
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 29 4.8
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 29 4.8
BC042613-1|AAH42613.1| 753|Homo sapiens CCDC14 protein protein. 29 4.8
BC040285-1|AAH40285.1| 753|Homo sapiens CCDC14 protein protein. 29 4.8
AL833312-1|CAD91162.1| 455|Homo sapiens hypothetical protein pr... 29 4.8
BC117268-1|AAI17269.1| 463|Homo sapiens zinc finger protein 486... 28 6.4
BC027608-1|AAH27608.1| 503|Homo sapiens ZNF486 protein protein. 28 6.4
AB209550-1|BAD92787.1| 403|Homo sapiens PREDICTED: KRAB domain ... 28 6.4
X72449-1|CAA51117.1| 126|Homo sapiens Ig kappa light chain (VJ)... 28 8.5
AK127999-1|BAC87224.1| 232|Homo sapiens protein ( Homo sapiens ... 28 8.5
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 180 bits (437), Expect = 1e-45
Identities = 81/103 (78%), Positives = 98/103 (95%)
Frame = +3
Query: 30 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 209
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 210 VDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
VDIRV KGGGHVAQ+YAIRQ++SKAL+A YQKYVDEASKKEI
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 180 bits (437), Expect = 1e-45
Identities = 81/103 (78%), Positives = 98/103 (95%)
Frame = +3
Query: 30 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 209
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 210 VDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
VDIRV KGGGHVAQ+YAIRQ++SKAL+A YQKYVDEASKKEI
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 180 bits (437), Expect = 1e-45
Identities = 81/103 (78%), Positives = 98/103 (95%)
Frame = +3
Query: 30 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 209
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 210 VDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
VDIRV KGGGHVAQ+YAIRQ++SKAL+A YQKYVDEASKKEI
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 180 bits (437), Expect = 1e-45
Identities = 81/103 (78%), Positives = 98/103 (95%)
Frame = +3
Query: 30 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 209
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 210 VDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
VDIRV KGGGHVAQ+YAIRQ++SKAL+A YQKYVDEASKKEI
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (330), Expect = 1e-32
Identities = 60/81 (74%), Positives = 74/81 (91%)
Frame = +3
Query: 30 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 209
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 210 VDIRVTGKGGGHVAQVYAIRQ 272
VDIRV KGGGHVAQ+Y Q
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQ 86
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 109 bits (262), Expect = 2e-24
Identities = 52/100 (52%), Positives = 71/100 (71%)
Frame = +3
Query: 33 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 212
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ +G+
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 213 DIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKK 332
DI V KG GHV Q+YA+ Q +SKAL+ CY KYVDEAS++
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEE 117
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 54 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTG 230
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ T
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 231 KGGGHVAQVYAIRQAVSKAL 290
GGG AQ AIR A++KAL
Sbjct: 333 SGGGRSAQAGAIRLAMAKAL 352
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 54 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTG 230
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ T
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 231 KGGGHVAQVYAIRQAVSKAL 290
GGG AQ AIR A++KAL
Sbjct: 239 SGGGRSAQAGAIRLAMAKAL 258
>AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein.
Length = 1430
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 5 EGAGGKT*TNPSRT--SFRP*ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGT 175
EGA G + + PS + R E C+CG++ +TRT A PR G ++S+ T G+
Sbjct: 47 EGAQGLSLSKPSPSLGCGRRGEVCDCGTVCETRTAPAAPTMASPR-GSGSSTSLSTVGS 104
>BX537652-1|CAD97804.1| 793|Homo sapiens hypothetical protein
protein.
Length = 793
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 35 PSRTSFRP*ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGTYPFARQGKVL 205
PS + + + + G T WS+ PP P + S VQT G FA QGK +
Sbjct: 81 PSHSESQATPHSSYGLCTSTPVWSLQ---RPPCPPKVH-SEVQTDGNSQFASQGKTV 133
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 141 EPRLLQYKLQEPILLLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVD 317
+P L K EP L +KF +D+R + + H+ V+ + + + L YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 141 EPRLLQYKLQEPILLLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVD 317
+P L K EP L +KF +D+R + + H+ V+ + + + L YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC042613-1|AAH42613.1| 753|Homo sapiens CCDC14 protein protein.
Length = 753
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 35 PSRTSFRP*ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGTYPFARQGKVL 205
PS + + + + G T WS+ PP P + S VQT G FA QGK +
Sbjct: 41 PSHSESQATPHSSYGLCTSTPVWSLQ---RPPCPPKVH-SEVQTDGNSQFASQGKTV 93
>BC040285-1|AAH40285.1| 753|Homo sapiens CCDC14 protein protein.
Length = 753
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 35 PSRTSFRP*ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGTYPFARQGKVL 205
PS + + + + G T WS+ PP P + S VQT G FA QGK +
Sbjct: 41 PSHSESQATPHSSYGLCTSTPVWSLQ---RPPCPPKVH-SEVQTDGNSQFASQGKTV 93
>AL833312-1|CAD91162.1| 455|Homo sapiens hypothetical protein
protein.
Length = 455
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 35 PSRTSFRP*ENCNCGSILQTRTWSVACKWTPPRPGRTQTSSVQTTGTYPFARQGKVL 205
PS + + + + G T WS+ PP P + S VQT G FA QGK +
Sbjct: 41 PSHSESQATPHSSYGLCTSTPVWSLQ---RPPCPPKVH-SEVQTDGNSQFASQGKTV 93
>BC117268-1|AAI17269.1| 463|Homo sapiens zinc finger protein 486
protein.
Length = 463
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -1
Query: 326 RCFVYIFLVASHKGFRDG-----LSDCINLCNMSTTFSSHSNIHTRE 201
+ F+Y + + +HK G +C N T SSH IHT E
Sbjct: 273 KAFMYPYTLTTHKIIHTGEQPYKCKECDKAFNHPATLSSHKKIHTGE 319
>BC027608-1|AAH27608.1| 503|Homo sapiens ZNF486 protein protein.
Length = 503
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -1
Query: 326 RCFVYIFLVASHKGFRDG-----LSDCINLCNMSTTFSSHSNIHTRE 201
+ F+Y + + +HK G +C N T SSH IHT E
Sbjct: 313 KAFMYPYTLTTHKIIHTGEQPYKCKECDKAFNHPATLSSHKKIHTGE 359
>AB209550-1|BAD92787.1| 403|Homo sapiens PREDICTED: KRAB domain
only 2 variant protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -1
Query: 326 RCFVYIFLVASHKGFRDG-----LSDCINLCNMSTTFSSHSNIHTRE 201
+ F+Y + + +HK G +C N T SSH IHT E
Sbjct: 213 KAFMYPYTLTTHKIIHTGEQPYKCKECDKAFNHPATLSSHKKIHTGE 259
>X72449-1|CAA51117.1| 126|Homo sapiens Ig kappa light chain (VJ)
protein.
Length = 126
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 87 CKRGHGVLRVNG-RPLDLVEPRLLQYKLQEPILL--LGKEKFSGVDIRVTGKGGG 242
C+ +L +NG LD LQ Q P LL LG + SGV R TG G G
Sbjct: 38 CRSSQSLLHINGYNYLDWY----LQKPGQSPQLLIYLGSNRASGVPDRFTGSGSG 88
>AK127999-1|BAC87224.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ46117 fis, clone TESTI2037572. ).
Length = 232
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 68 CNCGSILQTRTWSVACKW 121
C+CG+ L +TW+ C W
Sbjct: 28 CSCGTQLWLQTWACLCTW 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,364,955
Number of Sequences: 237096
Number of extensions: 1227295
Number of successful extensions: 4076
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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