Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F22
         (338 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   194   3e-50
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   194   3e-50
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    34   0.054
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    34   0.054
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    27   6.2  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  194 bits (472), Expect = 3e-50
 Identities = 89/110 (80%), Positives = 104/110 (94%)
 Frame = +3

Query: 9   VQEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 188
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 189 GKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
           GKEKF+GVDIRV   GGGHVAQ+YAIRQA+SKAL+A YQKYVDEASKKEI
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEI 110


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  194 bits (472), Expect = 3e-50
 Identities = 89/110 (80%), Positives = 104/110 (94%)
 Frame = +3

Query: 9   VQEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 188
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 189 GKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
           GKEKF+GVDIRV   GGGHVAQ+YAIRQA+SKAL+A YQKYVDEASKKEI
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEI 110


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 33.9 bits (74), Expect = 0.054
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 6   RVQEARREPIQAVQVFGRKKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPIL 182
           R+ E  R+ I   +    +KTA A V     G G + +NG+ +   E    + +L  P+ 
Sbjct: 260 RIDEEGRQYITTYECL--RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQ 317

Query: 183 LLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASK 329
               E    VD+    +GGG   Q  AIR  ++ +L +   + + E+ +
Sbjct: 318 F--SELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 33.9 bits (74), Expect = 0.054
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
 Frame = +3

Query: 6   RVQEARREPIQAVQVFGRKKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPIL 182
           R+ E  R+ I   +    +KTA A V     G G + +NG+ +   E    + +L  P+ 
Sbjct: 260 RIDEEGRQYITTYECL--RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQ 317

Query: 183 LLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASK 329
               E    VD+    +GGG   Q  AIR  ++ +L +   + + E+ +
Sbjct: 318 F--SELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMR 364


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +3

Query: 63   KTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTGKGGG 242
            +TA    YC+     LR+ G  L +V+  L  + L +         F G+ ++ T  GGG
Sbjct: 1717 ETARRAMYCQMQRYQLRLAG--LQIVQQLLELHGLLDAAQYSLLNGFLGLHLKSTSSGGG 1774

Query: 243  HVAQVYAIRQAVSKALMACYQK 308
                  ++       +++ YQK
Sbjct: 1775 STGSGSSLHVLGQLNMISAYQK 1796


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,429,984
Number of Sequences: 53049
Number of extensions: 368487
Number of successful extensions: 1012
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)