Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F22
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 155 6e-39
Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z78200-4|CAB01582.1| 289|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 3.4
U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily ass... 26 6.0
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 6.0
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 6.0
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 6.0
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 155 bits (377), Expect = 6e-39
Identities = 67/102 (65%), Positives = 90/102 (88%)
Frame = +3
Query: 33 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 212
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 213 DIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKEI 338
DIR+ GGGHVAQ+YA+RQA++KAL+A Y KYVDE SK+E+
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKREL 106
>Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical
protein M153.3 protein.
Length = 176
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 122 SIYTQHSMSSFAVCYRSCSFLTAEN 48
S+ QHS+ +F VC ++C F + N
Sbjct: 130 SLTCQHSVFAFRVCRKTCGFCASVN 154
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 138 VEPRLLQYKLQEPILLLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMAC 299
V+ +L + EPI++ K + + +R T + GH+ ++Y + A K + C
Sbjct: 1705 VKSSVLPAEAHEPIVIHNKHVLAELIMRETHEINGHLPELYTQKAASLKYWILC 1758
>Z78200-4|CAB01582.1| 289|Caenorhabditis elegans Hypothetical
protein T04H1.5 protein.
Length = 289
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 207 GVDIRVTGKGGGHVAQVYAIRQAVSKALMACYQKYVDEASKKE 335
GVDI+ KG GH +V A+++ ++ + A QK ++A+K E
Sbjct: 107 GVDIKANRKGLGH--EVEAVQER-NERVEAVMQKMKEQAAKHE 146
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 290 KGFRDGLSDCINLCNMSTTFSSHSN 216
KG+ DG+ CI LC +ST F+ S+
Sbjct: 423 KGY-DGMQLCIELCVLSTKFTCRSS 446
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 138 VEPRLLQYKLQEPILLLGKEKFSGVDIRVTGKGGGHVAQVYAIRQAVSKALMAC 299
V+ +L + EPI++ K + + +R T + GH+ ++Y + A K + C
Sbjct: 1705 VKSSVLPAEAHEPIVIHNKHVLAELIMRETHEINGHLPELYTQKAASLKYWILC 1758
>U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform c protein.
Length = 860
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 117 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 206
NGRPLDL R + + + L EKFS
Sbjct: 584 NGRPLDLYSERYMSISPEAVVRLELNEKFS 613
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
gene nameprotein 152, isoform a protein.
Length = 2560
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 117 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 206
NGRPLDL R + + + L EKFS
Sbjct: 2255 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2284
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 117 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 206
NGRPLDL R + + + L EKFS
Sbjct: 2197 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2226
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 117 NGRPLDLVEPRLLQYKLQEPILLLGKEKFS 206
NGRPLDL R + + + L EKFS
Sbjct: 2379 NGRPLDLYSERYMSISPEAVVRLELNEKFS 2408
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,716,447
Number of Sequences: 27780
Number of extensions: 179930
Number of successful extensions: 380
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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