Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F20
         (239 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   0.69 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   1.6  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   2.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   4.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   4.9  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    19   6.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    19   8.5  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 0.69
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = +2

Query: 89  LCAEHASWLFDSTIEISYCHCDEGYEGEGISQ-CV--PIGR 202
           LC     W   S      CHC  GY+ +   Q C   PIG+
Sbjct: 233 LCKGDGKWYLPS----GGCHCKPGYQADVEKQECTECPIGK 269


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 83  GALCAEHASWLF 118
           GALC E A W F
Sbjct: 91  GALCKEEALWNF 102


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +2

Query: 29  GYVKDQNEACIPDAQLCSG 85
           GY++++ + C+P ++   G
Sbjct: 76  GYLRNKKKVCVPRSKCLPG 94


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 114 NQDACSAHKAPLHSCAS 64
           N+ +  AHK  L +C+S
Sbjct: 43  NEASLKAHKVVLSACSS 59


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 170 EGISQCVPIGRTCDV 214
           + +  C+P G+ CDV
Sbjct: 434 KNLKVCLPPGQYCDV 448


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 4/12 (33%), Positives = 10/12 (83%)
 Frame = +2

Query: 29  GYVKDQNEACIP 64
           GY++++ + C+P
Sbjct: 76  GYLRNKKKVCVP 87


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -1

Query: 236 HRDYNHLQRHTFDQSVHIERFLHPRILRHSDNS*SRLSN 120
           H ++NH Q     +S +     H     HS  S +R +N
Sbjct: 424 HYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNNRHNN 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,523
Number of Sequences: 438
Number of extensions: 1139
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)