Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F18
         (240 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3IXK3 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_UPI0000D57806 Cluster: PREDICTED: similar to M142.8; n=...    31   6.5  
UniRef50_Q0V0V4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  

>UniRef50_A3IXK3 Cluster: Putative uncharacterized protein; n=1;
           Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
           protein - Cyanothece sp. CCY 0110
          Length = 437

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 187 IIIHDLSHSKTYVDYKMTLENITYTQLK 104
           +IIH+++HS+ Y +Y  +L N  Y   K
Sbjct: 201 LIIHEMTHSQQYENYSSSLSNFGYNYFK 228


>UniRef50_UPI0000D57806 Cluster: PREDICTED: similar to M142.8; n=1;
           Tribolium castaneum|Rep: PREDICTED: similar to M142.8 -
           Tribolium castaneum
          Length = 208

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +2

Query: 179 DDNDDVPTLAGETFAALQEF 238
           D  DDVP L+  TF ALQEF
Sbjct: 3   DGEDDVPQLSASTFQALQEF 22


>UniRef50_Q0V0V4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 347

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 214 FSCECWYIIIIIHDLSHSKTYVDYKMTLENITYTQLK*IKTIEMLTNFKVSL 59
           F+C C +III+    +H +   D++    ++ Y QL  +  I   T  K+SL
Sbjct: 59  FTCYCAFIIIVTLR-AHERKLFDFEYIRVSLVYVQLSEVFYILTTTTLKISL 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,716,858
Number of Sequences: 1657284
Number of extensions: 2372571
Number of successful extensions: 5182
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5182
length of database: 575,637,011
effective HSP length: 58
effective length of database: 479,514,539
effective search space used: 10069805319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)